DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and rnf150a

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001139044.1 Gene:rnf150a / 559804 ZFINID:ZDB-GENE-060213-1 Length:418 Species:Danio rerio


Alignment Length:464 Identity:155/464 - (33%)
Similarity:215/464 - (46%) Gaps:101/464 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AFLNWSYVEHGNMLCNMEFAQEQARYGEGKVLNVTGRLIHITATD--NF----SDDYACTPYIRG 128
            ||:|.:|::........: ..|..||||           |....|  .|    .|..||.    |
Zfish    42 AFVNITYLDPVTSEIKTD-RSECGRYGE-----------HSPKRDARGFVFMPQDRQACD----G 90

  Fly   129 TLGAPIPDKGETWIALVRRGRCTFEEKVKHVYQQNAAGVIIYN--DKQVMQLEKMQIKGKTRNIA 191
            ....|:|.....||||:.:|.|||.||::|....||:.|:|:|  .........|...| |.::.
Zfish    91 NTRFPLPHPSIPWIALIAKGNCTFREKIRHAAALNASAVVIFNVGSSNSNDTITMPHHG-TGDVV 154

  Fly   192 AVITYQNIGQDLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFY 256
            |::..:..|:::...|:|...|.:.|..|.|.::  ..::||||:||||||||||||||.||:||
Zfish   155 AIMIPEPKGREIMALLEKNITVAMHISIGTRNLQ--KYVSRTSVVFVSISFIVLMIISLAWLVFY 217

  Fly   257 YIQRFRYMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSD-EKDLDSDCCAICIEAYKPTDTIRILP 320
            |||||||..|:|:..|.|....||||.|:..:|.:..| |.|.|.|.||:|||.|||.|.:||||
Zfish   218 YIQRFRYANARDRSQRRLGDAAKKAISKLQVRTIRKGDKETDSDFDNCAVCIEDYKPNDVVRILP 282

  Fly   321 CKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYGYVFLGSEESILEYQPDPPQGLALVEARDESADL 385
            |:|.||:||:||||.:||||||||:::||..|.               ||               
Zfish   283 CRHVFHRNCVDPWLQDHRTCPMCKMNILKALGI---------------PP--------------- 317

  Fly   386 NRSRDFVVDFPRVFVLDSG----CVVGAREMLFPCRIPERSQSSLSLRQARDWVSLMSNKLEEQQ 446
              :.|...|.|..:...||    .|.||.|:       ...:|||.|.|......|.    .:.|
Zfish   318 --NTDCSDDAPPDYETSSGQPSIAVTGASEV-------SVGESSLVLDQPLRITGLS----HDYQ 369

  Fly   447 GLRSMRNDEMQQQLLSARESARHRRSRSADGRYSTGCFGGRQRQPSVLVSSLGQPQLHSEVAQMQ 511
            .:.|:..|.....:.|   |.:|:.|.|.|              |.::      |.   |:|::|
Zfish   370 EMNSVPADAESPHIAS---SEQHQPSMSND--------------PDIM------PM---EIAELQ 408

  Fly   512 RSNSSQALK 520
            .....:.:|
Zfish   409 SDLEQEDVK 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 40/151 (26%)
UPF0233 226..>258 CDD:299753 22/31 (71%)
zf-RING_2 301..344 CDD:290367 30/42 (71%)
rnf150aNP_001139044.1 PA_GRAIL_like 45..180 CDD:239037 40/151 (26%)
UPF0233 <194..>219 CDD:299753 21/24 (88%)
zf-RING_2 263..306 CDD:290367 30/42 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579409
Domainoid 1 1.000 86 1.000 Domainoid score I8050
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I3559
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 1 1.000 - - otm24367
orthoMCL 1 0.900 - - OOG6_107948
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3602
SonicParanoid 1 1.000 - - X295
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.890

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