DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and rnf130

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_009289393.1 Gene:rnf130 / 553950 ZFINID:ZDB-GENE-050522-525 Length:428 Species:Danio rerio


Alignment Length:339 Identity:132/339 - (38%)
Similarity:192/339 - (56%) Gaps:23/339 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LPPLTFPATTTTLVAAMSIANQDLERYFRPGNGTHSFSGMEDRIAVDVYNY--AFLNWSYVEH-G 80
            |..|..||:.::.:.|:.:|      :..|   ..|.|...|:..|:..:|  |.:|.:.::| |
Zfish     2 LKRLAAPASCSSCLLALLLA------FVSP---RCSLSIGADKTMVNKEDYYSAIVNATVLDHKG 57

  Fly    81 NMLCNMEFAQEQARYGEGK-VLNVTGRLIHITATDNFSDDYACTPYIRGTLGAPIPDKGETWIAL 144
            |.  .....:...|||:.. .....|.::...|.:...|...|.|:.|..    :|.|...|:|:
Zfish    58 NP--QQMVTKNDGRYGQNSPKTEAKGIVVAPAAVNGAVDLQGCCPHTRFI----VPPKTTHWVAI 116

  Fly   145 VRRGRCTFEEKVKHVYQQNAAGVIIYNDKQVMQLEKMQIKGKTRNIAAVITYQNIGQDLSLTLDK 209
            ::||:|||:||:......||:.|||||:........|..:| |.:|.||:..::.|:::...|:|
Zfish   117 MQRGKCTFKEKILKAAAFNASAVIIYNNNTKEDTVTMAHEG-TGDIVAVMITESFGKEILGFLEK 180

  Fly   210 GYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNL 274
            ...|.:|:|.|.||:.  .::||.|::|||||||||||||..|||||:||:.|...|:|:..|.|
Zfish   181 NQTVLVSVIVGSRGMP--KNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRDTSARDRSQRRL 243

  Fly   275 CSVTKKAIMKIPTKTGKFSD-EKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHR 338
            ....||||.|:.|:|.|..| |.:.|.:.||:|||.|:..|.:|||||||.|||.|:||||.||.
Zfish   244 GDAAKKAISKLTTRTVKRGDKETEPDFNHCAVCIEGYQLNDVVRILPCKHVFHKMCVDPWLNEHC 308

  Fly   339 TCPMCKLDVLKFYG 352
            |||||||::||..|
Zfish   309 TCPMCKLNILKALG 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 41/145 (28%)
UPF0233 226..>258 CDD:299753 21/31 (68%)
zf-RING_2 301..344 CDD:290367 28/42 (67%)
rnf130XP_009289393.1 PA_GRAIL_like 49..188 CDD:239037 41/145 (28%)
zf-RING_2 271..314 CDD:290367 28/42 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I8064
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I3559
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 1 1.000 - - otm24367
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22765
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X295
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.070

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