DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf122

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_038951021.1 Gene:Rnf122 / 502091 RGDID:1561238 Length:183 Species:Rattus norvegicus


Alignment Length:131 Identity:36/131 - (27%)
Similarity:58/131 - (44%) Gaps:25/131 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 VRTISSLNRTSVLFVSISFIVLMII-------SLVWLIF--YYIQRFRYMQAKDQQSRNLCSVTK 279
            |.|..|.:...:.|..:...:.|:|       .::.|||  |:|.:.|.....::..      .|
  Rat    45 VSTNKSCSMPPISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRNQAQSERYG------YK 103

  Fly   280 KAIMKIPTKTGKFSDEKDLD--SDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPM 342
            :.::|        .|.|.|.  ...||:|:|.:|..|.:.:|||:|.||:.|:..||.....|||
  Rat   104 EVVLK--------GDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPM 160

  Fly   343 C 343
            |
  Rat   161 C 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
UPF0233 226..>258 CDD:299753 9/40 (23%)
zf-RING_2 301..344 CDD:290367 19/43 (44%)
Rnf122XP_038951021.1 RING-H2_RNF24_like 119..165 CDD:319383 19/43 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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