Protein Alignment gol and Traip

DIOPT Version :10

• Sequence 1: NP_001163300.1
• Gene: gol / 38006
• FlyBaseID: FBgn0004919
• Length: 601
• Species: Drosophila melanogaster
• Sequence 2: NP_001102474.1
• Gene: Traip / 367167
• RGDID: 1309761
• Length: 469
• Species: Rattus norvegicus
• Alignment Length: 292
• Identity: 60/292 - (20%)
• Similarity: 106/292 - (36%)
• Gaps: 81/292 - (27%)

  Fly   303 CAICIEAYKPTDTIRILPCKHEFHKNCIDPWL--IEHRTCPMCKLDVLK-------FYGYVFLGS 358
            |.||.:.:..:..:..:.|.|.||..|:..|.  ...||||.|::.|.|       |:.  ....
  Rat     7 CTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKKTIINKLFFD--LAQE 69

  Fly   359 EESILE---------------YQPDPPQGLALVEARDESADLNRSRDFVVDFPRVFVLDSGCVVG 408
            |||:|:               .|.|.       |.||..|.::..||
  Rat    70 EESVLDAEFLKNELDSIKAQLSQKDR-------EKRDSQAIIDTLRD------------------ 109

  Fly   409 AREMLFPCRIPERSQSSLSLRQARDWVSLMSNKLEEQQGLRSMRNDEMQQQLLSARESARHRRSR 473
                    .:.||:.:..||:.|.:...::.:.|::|......:.||.:.    |:|.||..:|:
  Rat   110 --------TLEERNATVESLQNALNKAEMLCSTLKKQMKFLEQQRDETKH----AQEEARQLKSK 162

  Fly   474 SADGRYSTGCFGGRQRQPSVLVSSLGQPQLHSEVAQM---------QRSNSSQALKHLTDAAHAQ 529
            .............::.:...::..:|..|  |.|.|:         :..|..:|.|     |..:
  Rat   163 MKTMEQIELLLQSQRSEVEEMIRDMGVGQ--SAVEQLAVYCISLKKEYENLKEARK-----ASGE 220

  Fly   530 SRQRQRESFDFARTRRRFMRRESDE--ISLRS 559
            ...|.|:....:|::.:.:..|.|:  :.|||
  Rat   221 LADRLRKDLASSRSKLKTVNTELDQAKLELRS 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gol	NP_001163300.1	PA_GRAIL_like	73..217	CDD:239037
		HRD1	<237..>347	CDD:227568	14/45 (31%)
		RING-H2_RNF130-like	302..347	CDD:438330	14/45 (31%)
Traip	NP_001102474.1	RING-H2_TRAIP	6..50	CDD:438143	13/42 (31%)
		EnvC	65..>279	CDD:443969	43/234 (18%)