DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf150

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001178022.1 Gene:Rnf150 / 364983 RGDID:1304572 Length:437 Species:Rattus norvegicus


Alignment Length:303 Identity:125/303 - (41%)
Similarity:176/303 - (58%) Gaps:38/303 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AFLNWSYVE----------HGNMLCNMEFAQEQARYGE--------GKVLNVTGRLIHITATDNF 116
            ||:|.:|.|          .|....:.| ..|..||||        |:|  |....:|       
  Rat    42 AFVNITYTEPESGAAVAGGGGGAELHTE-KSECGRYGEHSPKQDARGEV--VMASSVH------- 96

  Fly   117 SDDYACTPYIRGTLGAPIPDKGETWIALVRRGRCTFEEKVKHVYQQNAAGVIIYN-DKQVMQLEK 180
             |..||.|..:    ...|..|:.||||:.:|.||:.:|:::.:.|||:.|:|:| .....:...
  Rat    97 -DRLACDPNTK----FAAPAHGKHWIALIPKGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETIT 156

  Fly   181 MQIKGKTRNIAAVITYQNIGQDLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVL 245
            |...| ..:|.|::..:..|::|...|::...||:.|..|.|.::  ..::||||:|||||||||
  Rat   157 MPHAG-VEDIVAIMIPEPKGKELVSLLERNVTVTMYITIGTRNLQ--KYVSRTSVVFVSISFIVL 218

  Fly   246 MIISLVWLIFYYIQRFRYMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSD-EKDLDSDCCAICIEA 309
            |||||.||:|||||||||..|:|:..|.|....||||.|:..:|.:..| |.:.|.|.||:|||.
  Rat   219 MIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEG 283

  Fly   310 YKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYG 352
            |||:|.:|||||:|.|||:|:||||::||||||||:::||..|
  Rat   284 YKPSDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALG 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 43/162 (27%)
UPF0233 226..>258 CDD:299753 22/31 (71%)
zf-RING_2 301..344 CDD:290367 30/42 (71%)
Rnf150NP_001178022.1 PA_GRAIL_like 45..192 CDD:239037 43/162 (27%)
UPF0233 <206..>231 CDD:299753 21/24 (88%)
zf-RING_2 275..318 CDD:290367 30/42 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339636
Domainoid 1 1.000 89 1.000 Domainoid score I7658
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 216 1.000 Inparanoid score I3514
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 1 1.000 - - otm45949
orthoMCL 1 0.900 - - OOG6_107948
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X295
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.860

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