DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf149

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_017452282.1 Gene:Rnf149 / 363222 RGDID:1308460 Length:394 Species:Rattus norvegicus


Alignment Length:425 Identity:138/425 - (32%)
Similarity:191/425 - (44%) Gaps:99/425 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 WSYVEHGNMLCNMEFAQEQARYGEGKVLNVTGRLIHITATDNFSDDYACTPYIR----GTLG-AP 133
            ||..|.|             |:|:..:......|:.:....  :|...|.|..|    |.|| ||
  Rat    55 WSVTESG-------------RFGDSSLREERQGLVGVPRAP--ADAEGCAPDTRFVAPGALGNAP 104

  Fly   134 IPDKGETWIALVRRGRCTFEEKVKHVYQQNAAGVIIYNDKQV-MQLEKMQIKGKTRNIAAVITYQ 197
                   |:|||.||.|||::||....::||:.|::||.::. ...|.|...|....:..:|:|.
  Rat   105 -------WVALVARGGCTFKDKVLAAARRNASAVVVYNQERYGNATEPMSHAGTGSIVVIMISYP 162

  Fly   198 NIGQDLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFR 262
            . |:::|..:.||..|.:.|..|.|.::..  ::..||:||:|:||.:|||||.||||||||||.
  Rat   163 K-GREISDLVQKGIPVKMRIEIGTRHMQEF--ISGQSVVFVAIAFITMMIISLAWLIFYYIQRFL 224

  Fly   263 YMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEK-DLDSDCCAICIEAYKPTDTIRILPCKHEFH 326
            | ......|:|....|||.|.::|..|.|..::. |:|::.||:|||.:|..|.||||||||.||
  Rat   225 Y-TGSQFGSQNHRKETKKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFH 288

  Fly   327 KNCIDPWLIEHRTCPMCKLDVLKFYGYVFLGSEESILEYQPDPPQGLALVEARDESADLNRSRDF 391
            :.||||||::|||||||||||:|..||  .|        .|:..|.|.:.||...|..:......
  Rat   289 RICIDPWLLDHRTCPMCKLDVIKALGY--WG--------DPEDAQDLPIPEAAPGSVSVGNLSVT 343

  Fly   392 VVDFPRVFVLDSGCVVGAREMLFPCRIPERSQSSLSLRQARDWVSLMSNKLEEQQGLRSMRNDEM 456
            |.|                        .|||:|:|...                           
  Rat   344 VQD------------------------EERSESNLPSS--------------------------- 357

  Fly   457 QQQLLSARESARHRRSRSADGRYSTGCFGGRQRQP 491
                 |:.|...||.....|....|...|..:..|
  Rat   358 -----SSSEFGPHRPCLKEDAEEDTALLGAGRSDP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 42/148 (28%)
UPF0233 226..>258 CDD:299753 17/31 (55%)
zf-RING_2 301..344 CDD:290367 29/42 (69%)
Rnf149XP_017452282.1 PA_GRAIL_like 45..181 CDD:239037 42/148 (28%)
UPF0233 <200..>220 CDD:299753 14/19 (74%)
zf-RING_2 263..306 CDD:290367 29/42 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I7752
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 216 1.000 Inparanoid score I3514
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 1 1.000 - - otm45949
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X295
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1010.030

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