DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf150

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_017168354.1 Gene:Rnf150 / 330812 MGIID:2443860 Length:450 Species:Mus musculus


Alignment Length:309 Identity:121/309 - (39%)
Similarity:176/309 - (56%) Gaps:37/309 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AFLNWSYVE----------HGNMLCNMEFAQEQARYGE-GKVLNVTGRLIHITATDNFSDDYACT 123
            ||:|.:|:|          .|....:.| ..|..|||| ....:..|.::..::.   .|..||.
Mouse    42 AFVNITYLEPEPGAAVAGSGGGAELHTE-KSECGRYGEHSPKQDARGEVVMASSA---QDRLACD 102

  Fly   124 PYIRGTLGAPIPDKGETWIALVRRGRCTFEEKVKHVYQQNAAGVIIYN-DKQVMQLEKMQIKGKT 187
            |..:    ...|..|:.||||:.:|.||:.:|:::.:.|||:.|:|:| .....:...|...| .
Mouse   103 PNTK----FAAPAHGKHWIALIPKGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAG-V 162

  Fly   188 RNIAAVITYQNIGQDLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVW 252
            .:|.|::..:..|:::...|::...||:.|..|.|.::  ..::||||:||||||||||||||.|
Mouse   163 EDIVAIMIPEPKGKEIVSLLERNITVTMYITIGTRNLQ--KYVSRTSVVFVSISFIVLMIISLAW 225

  Fly   253 LIFYYIQRFRYMQAKDQQS-------------RNLCSVTKKAIMKIPTKTGKFSD-EKDLDSDCC 303
            |:|||||||||..|:|:..             |.|....||||.|:..:|.:..| |.:.|.|.|
Mouse   226 LVFYYIQRFRYANARDRNQYTIATGQDWQLYRRRLGDAAKKAISKLQVRTIRKGDKETESDFDNC 290

  Fly   304 AICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYG 352
            |:|||.|||.|.:|||||:|.|||:|:||||::||||||||:::||..|
Mouse   291 AVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALG 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 39/155 (25%)
UPF0233 226..>258 CDD:299753 22/31 (71%)
zf-RING_2 301..344 CDD:290367 30/42 (71%)
Rnf150XP_017168354.1 PA_GRAIL_like 45..192 CDD:239037 39/155 (25%)
RING-H2_GRAIL 289..336 CDD:319582 31/46 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835998
Domainoid 1 1.000 89 1.000 Domainoid score I7848
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 216 1.000 Inparanoid score I3593
Isobase 1 0.950 - 0 Normalized mean entropy S3321
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 1 1.000 - - otm43862
orthoMCL 1 0.900 - - OOG6_107948
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3602
SonicParanoid 1 1.000 - - X295
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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