DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf128

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001166820.1 Gene:Rnf128 / 315911 RGDID:1566282 Length:428 Species:Rattus norvegicus


Alignment Length:428 Identity:134/428 - (31%)
Similarity:201/428 - (46%) Gaps:79/428 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AFLNWSY-VEHGNMLCNMEFAQEQARYGEGKVLN-VTGRLIHITATDNFSDDYACTPYIRGTL-- 130
            |:||.|: |.|..:...:....|:..||:...|. |:|.|:   ..|......||.|:...|:  
  Rat    45 AYLNVSWRVPHPGVNRTVWELSEEGVYGQDSPLEPVSGVLV---PPDGPGALNACNPHTNFTVPT 106

  Fly   131 --GAPIPDKGETWIALVRR-GRCTFEEKVKHVYQQNAAGVIIYNDKQVMQLEKMQIKGKTRN--- 189
              |:.:.   .:|:||::| |.|||.:|:...|::.|:|.:|:|           ..| |||   
  Rat   107 VWGSTVQ---VSWLALIQRGGGCTFADKIHLAYERGASGAVIFN-----------FPG-TRNEVI 156

  Fly   190 ---------IAAVITYQNIGQDLSLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVL 245
                     |.|::.....|..:..::.:|..||:.|..|::....:   |..|:.|||:||.::
  Rat   157 PMSHPGAGDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWV---NHYSIFFVSVSFFII 218

  Fly   246 MIISLVWLIFYYIQRFRYMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEKDL--DSDCCAICIE 308
            ...::.:.|||..:|.|..:|:.::.|.|.:..||||.::..:|.|..| |::  |.|.||:|||
  Rat   219 TAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGD-KEIGPDGDSCAVCIE 282

  Fly   309 AYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLKFYGYVFLGSEESILEYQPDPPQGL 373
            .|||.|.:|||.|.|.|||.|:||||:|||||||||.|:||..| :.:..|:..:..|. |....
  Rat   283 LYKPNDVVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALG-IEVDVEDGSVSLQV-PVSNE 345

  Fly   374 ALVEARDESADLNRSRDFVVDFPRVFVLDSG--CVVGAREMLFPCRIPERSQSSLSLRQ------ 430
            |...|.....| |||.          ...||  .|.||.|.    .:.|.:||:....|      
  Rat   346 ASNTASPHEED-NRSE----------TASSGYASVQGADEP----PLEEHAQSANENLQLVNHEA 395

  Fly   431 ---ARDWVSLMSNKLEEQQGLRSMRNDEMQQQLLSARE 465
               |.|.|..:.|...|:        ||...|.::.||
  Rat   396 NSVAVDVVPHVDNPTFEE--------DETPDQEMAVRE 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 41/162 (25%)
UPF0233 226..>258 CDD:299753 10/31 (32%)
zf-RING_2 301..344 CDD:290367 30/42 (71%)
Rnf128NP_001166820.1 PA_GRAIL_like 48..193 CDD:239037 41/162 (25%)
zf-RING_2 275..318 CDD:290367 30/42 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I7752
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 216 1.000 Inparanoid score I3514
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45949
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X295
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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