DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and AT1G24580

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_973908.2 Gene:AT1G24580 / 2745762 AraportID:AT1G24580 Length:131 Species:Arabidopsis thaliana


Alignment Length:137 Identity:31/137 - (22%)
Similarity:61/137 - (44%) Gaps:35/137 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 GVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAKDQ-------------QSRNL 274
            ||..:..:|..    |||:.:..|:.|:..::....:  ..|:..|:             |.::|
plant    12 GVLPLLVMNTV----VSITLLKNMVRSVFQIVASETE--SSMEIDDEPEDDFVTRRISITQFKSL 70

  Fly   275 CSVTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTI-RILPCKHEFHKNCIDPWL-IEH 337
            |...::             :|::...:|| :|:..:|..:.: .::.|||.||:.|:|.|. ..|
plant    71 CENIEE-------------EEEEKGVECC-VCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNH 121

  Fly   338 RTCPMCK 344
            .|||:|:
plant   122 TTCPLCR 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 28/123 (23%)
RING-H2_RNF130-like 302..347 CDD:438330 17/45 (38%)
AT1G24580NP_973908.2 RING_Ubox 84..128 CDD:473075 16/44 (36%)
Blue background indicates that the domain is not in the aligned region.

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