DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gol and toe-4

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_493231.1 Gene:toe-4 / 173144 WormBaseID:WBGene00012194 Length:489 Species:Caenorhabditis elegans


Alignment Length:63 Identity:23/63 - (36%)
Similarity:39/63 - (61%) Gaps:1/63 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 IPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDV 347
            |||...|.:|.:: |.|.|.:|:.:::..::|:.|.|.|.||..||..||..::.||||:.::
 Worm   416 IPTVYAKKTDGEE-DEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMCREEI 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 23/61 (38%)
RING-H2_RNF130-like 302..347 CDD:438330 16/44 (36%)
toe-4NP_493231.1 RING-H2_RHA1-like 430..476 CDD:438483 17/45 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.