DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and RNF38

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_073618.3 Gene:RNF38 / 152006 HGNCID:18052 Length:515 Species:Homo sapiens


Alignment Length:71 Identity:25/71 - (35%)
Similarity:43/71 - (60%) Gaps:3/71 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 VTKKAIMKIPTKTGKFS-DEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTC 340
            :||..|.::|:.  :|: :....:...|.:|:..::....:|:|||.||||..|:|.||..:|||
Human   438 LTKADIEQLPSY--RFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTC 500

  Fly   341 PMCKLD 346
            |:|:.|
Human   501 PICRAD 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
UPF0233 226..>258 CDD:299753
zf-RING_2 301..344 CDD:290367 18/42 (43%)
RNF38NP_073618.3 Bipartite nuclear localization signal 1 57..71
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..141
Bipartite nuclear localization signal 2 115..131
RING-H2_RNF38_like 460..504 CDD:319386 18/43 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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