DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and Rnf44

DIOPT Version :9

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001139497.1 Gene:Rnf44 / 105239 MGIID:2145310 Length:432 Species:Mus musculus


Alignment Length:80 Identity:29/80 - (36%)
Similarity:45/80 - (56%) Gaps:6/80 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 DQQSRNLCSVTKKAIMKIPTKTGKFS-DEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCID 331
            |.:.|.|   ||..|.::|:.  :|: |....:...|.:|...::....:|:|||.||||..|:|
Mouse   349 DAKPRGL---TKADIEQLPSY--RFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVD 408

  Fly   332 PWLIEHRTCPMCKLD 346
            .||..:||||:|:.|
Mouse   409 KWLKANRTCPICRAD 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
UPF0233 226..>258 CDD:299753
zf-RING_2 301..344 CDD:290367 18/42 (43%)
Rnf44NP_001139497.1 RING-H2_RNF38_like 377..421 CDD:319386 18/43 (42%)
RING-H2 finger (C3H2C3-type) 380..420 CDD:319386 18/39 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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