DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and nemf

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_002938173.3 Gene:nemf / 100497173 XenbaseID:XB-GENE-5772016 Length:1058 Species:Xenopus tropicalis


Alignment Length:414 Identity:72/414 - (17%)
Similarity:137/414 - (33%) Gaps:159/414 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 VRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNLCSVTKK-------- 280
            |:|:|::.:...::....|:        |  |...:.:..:..:|||...|  :.|:        
 Frog   506 VQTVSTIQKARKVYWFEKFL--------W--FISSENYLVIAGRDQQQNEL--IVKRYLNPGDVY 558

  Fly   281 ----------AIMKIPTKTGKFSDEKDL-DSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWL 334
                      .::|.|  ||:....:.| ::...|:|   |......|::          ...|.
 Frog   559 VHADLHGATSCVIKNP--TGEPVPPRTLTEAGTMAVC---YSAAWDARVI----------TSAWW 608

  Fly   335 IEH----RTCPMCKLDVLKFYGYVFLGS-----EESILEYQPDPPQGLALVEARDESADLNRSRD 390
            :.|    :|.|..:        |:..||     :::.|     ||..|                 
 Frog   609 VHHNQVSKTAPTGE--------YLTTGSFMIRGKKNFL-----PPSYL----------------- 643

  Fly   391 FVVDFPRVFVLDSGCV---VGAREMLFPCRIPERSQSSLSLRQARDWVSLMSNKLEEQQGLRSMR 452
             ::.|..:|.:|..||   .|.|.:                           .:|:|.....:..
 Frog   644 -MMGFGFLFKVDEPCVWRHKGERRV---------------------------KQLDEDMESVTSS 680

  Fly   453 NDEMQQQ----LLSARESARHRRSRSADGRYSTGCFGGRQRQPSVLVSSLGQPQLHSEV-----A 508
            |.|:..:    |.:|.|.:   .|...|.:..|     ::.|......|:|..|....|     :
 Frog   681 NTELAAEENIPLDAAEEDS---NSSEEDEKLDT-----QEEQRGPCTDSMGLEQKEYMVPADQNS 737

  Fly   509 QMQRSNS-------SQALKHLT------DAAHAQSRQRQRESFDFARTRRRFMRRESDEISL--- 557
            ..:.|||       .:|.|.|:      |.:|.|::          ||..:....|..:..|   
 Frog   738 DQESSNSEENSTIKEEAEKELSYPDTAIDLSHLQTK----------RTLSKAAPAELVDTPLENE 792

  Fly   558 RSLPRRGATSAAHRQLHREREPDD 581
            :|..|:..::...|:|.::::|:|
 Frog   793 KSSGRKHMSAKEKRELKKKKKPND 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 21/132 (16%)
RING-H2_RNF130-like 302..347 CDD:438330 8/48 (17%)
nemfXP_002938173.3 RqcH_arch 8..638 CDD:469043 27/166 (16%)
NFACT-C 956..1048 CDD:432191
Blue background indicates that the domain is not in the aligned region.

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