DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and rnf122

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001314745.1 Gene:rnf122 / 100329730 ZFINID:ZDB-GENE-091204-454 Length:155 Species:Danio rerio


Alignment Length:128 Identity:38/128 - (29%)
Similarity:63/128 - (49%) Gaps:29/128 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 NRT----SVLFVSISFIVLMII-------SLVWLIF--YYIQRFRYMQAKDQQSRNLCSVTKKAI 282
            |:|    ||.|..:...:.|:|       .::.|||  |:|.:.|: ||:.::..     .::.:
Zfish    20 NKTCTMPSVTFQDLPLNIYMVIFGTGIFVFVLSLIFCCYFISKLRH-QAQSERFG-----YREVV 78

  Fly   283 MKIPTKTGKFSDEK--DLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMC 343
            :|        .|.|  :|....||:|:|.:|..|.:.:|||:|.||:.|:..||.....||||
Zfish    79 LK--------GDPKKLNLHGQTCAVCLEDFKVKDELGVLPCQHAFHRRCVVKWLEVRCVCPMC 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 34/118 (29%)
RING-H2_RNF130-like 302..347 CDD:438330 19/42 (45%)
rnf122NP_001314745.1 RING_Ubox 91..137 CDD:473075 19/43 (44%)
Blue background indicates that the domain is not in the aligned region.

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