DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and rnf115

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001135621.1 Gene:rnf115 / 100216180 XenbaseID:XB-GENE-993231 Length:295 Species:Xenopus tropicalis


Alignment Length:118 Identity:35/118 - (29%)
Similarity:51/118 - (43%) Gaps:26/118 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 KKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMC 343
            |..|:.:||.|  .:.|:......|.:|.|.|...:.:|.|||.|.||.:||.|||..|.|||:|
 Frog   199 KDKIVSLPTVT--VTREQVAMGLECPVCKEDYAIEEQVRQLPCNHFFHGDCIVPWLELHDTCPVC 261

  Fly   344 KLDVLKFYGYVFLGSEESILEYQPDPPQGLALVEARDESADLNRSRDFVVDFP 396
            :..         |..|:|               ..:..|::.:.|.:|..|.|
 Frog   262 RKS---------LNGEDS---------------TRQAPSSEASGSNNFSSDSP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037
HRD1 <237..>347 CDD:227568 27/67 (40%)
RING-H2_RNF130-like 302..347 CDD:438330 21/44 (48%)
rnf115NP_001135621.1 zinc_ribbon_9 11..41 CDD:433910
RING-H2_RNF115 219..268 CDD:438452 22/57 (39%)
Blue background indicates that the domain is not in the aligned region.

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