DRSC/TRiP Functional Genomics Resources

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Protein Alignment gol and rnf128

DIOPT Version :10

Sequence 1:NP_001163300.1 Gene:gol / 38006 FlyBaseID:FBgn0004919 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_012824820.2 Gene:rnf128 / 100145171 XenbaseID:XB-GENE-877067 Length:403 Species:Xenopus tropicalis


Alignment Length:338 Identity:110/338 - (32%)
Similarity:172/338 - (50%) Gaps:48/338 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LTFPATTTTLVAAMSIANQDLERYFRPGNGTHSFSGMEDRIAVDV-YNYAFLNWSYVEHGNMLCN 85
            |.||.....|:..:|:                  :|.:.....:| |:|.:.|.:|.|.|     
 Frog    11 LPFPCLPALLLLNLSL------------------TGADTLWTANVNYSYVYDNRTYGEEG----- 52

  Fly    86 MEFAQEQARYGEGKVLNVTGRLIHITATD-NFSDDYACTPYIRGTLGAPIPDK-GETWIALV-RR 147
                 |...:|:...:.....|:.:..:: .|:   ||    :......:|.. ...||||: |.
 Frog    53 -----EIGVFGQDSPIERAAGLVVLPKSERTFT---AC----KDNTNFSVPHNWNGPWIALILRG 105

  Fly   148 GRCTFEEKVKHVYQQNAAGVIIYNDKQVMQLEKMQIKGKTRNIAAVITYQNIGQDLSLTLDKGYN 212
            |.|||.||:....::.|..|::||:....::.:|...| |::..|::.....|.::...:..|..
 Frog   106 GGCTFTEKINRAAERGARAVVVYNNGMDNEVFEMSHPG-TKDTVAIMIGNIKGNEIVEVIKGGMQ 169

  Fly   213 VTISIIEGRR-GVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNLCS 276
            |.:.|..||: |    |.:|..|:.|||:||.::...::.:.|||..:|:|..:|::::.:.|.:
 Frog   170 VMMVIEVGRKHG----SWINHYSIFFVSVSFFIVTAATVGYFIFYSARRWRLTRAQNKKMKQLKA 230

  Fly   277 VTKKAIMKIPTKTGKFSDEKDL--DSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRT 339
            ..||||.|:..:|.|..| |.|  |.|.||:|||.|||:|.:|||.|.|.||||||||||:||||
 Frog   231 EAKKAIGKLQLRTIKQGD-KVLGPDGDSCAVCIEPYKPSDVVRILTCNHFFHKNCIDPWLLEHRT 294

  Fly   340 CPMCKLDVLKFYG 352
            |||||.|:||..|
 Frog   295 CPMCKCDILKSLG 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
golNP_001163300.1 PA_GRAIL_like 73..217 CDD:239037 33/146 (23%)
HRD1 <237..>347 CDD:227568 57/111 (51%)
RING-H2_RNF130-like 302..347 CDD:438330 33/44 (75%)
rnf128XP_012824820.2 PA_GRAIL_like 38..174 CDD:239037 35/153 (23%)
COG5540 <208..302 CDD:227827 52/94 (55%)
RING-H2_RNF128-like 256..304 CDD:438454 35/47 (74%)

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