DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and YOX1

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_013685.1 Gene:YOX1 / 854981 SGDID:S000004489 Length:385 Species:Saccharomyces cerevisiae


Alignment Length:304 Identity:65/304 - (21%)
Similarity:106/304 - (34%) Gaps:73/304 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 IESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQN-------------APSVSSISRLLRGSSGSG 149
            :.|..|.:.:|...:....:.:|..:..|..|:|             .||.|...|    .:.:.
Yeast    95 LNSSQETVDESHENLLLTPLNSKKRDYSVSSKKNDILTPLSAAKSIIIPSASKEKR----RAFAF 155

  Fly   150 TSHSIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYT 214
            .:||               .|:....||.:......||.|...|:.::..|:..|.:...|....
Yeast   156 ITHS---------------QETFPKKEPKIDNAPLARRKRRRTSSQELSILQAEFEKCPAPSKEK 205

  Fly   215 REELAQSTGLTEARVQVWFSNRRARLRKQ-----LNTQQVPSFAPTSTSFG--ATPTTSAAPAPN 272
            |.|||:|..:||..||:||.|:|..:::|     .:|..:.:.:|.|....  |||..|...|. 
Yeast   206 RIELAESCHMTEKAVQIWFQNKRQAVKRQRIATSKSTTIIQTVSPPSPPLDVHATPLASRVKAD- 269

  Fly   273 MGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQPGTGSEFMTSTY 337
                                        .:...||.|.:||:  ||::....:|.......:||.
Yeast   270 ----------------------------ILRDGSSCSRSSSS--SPLENTPPRPHHSLNRRSSTP 304

  Fly   338 GVGSSNA-TYPSAAYSMPQTPATSAEQLRSQFASAAASGSHHPS 380
            .:..|.| |:.........||..::.  .|:......|..|.||
Yeast   305 SIKRSQALTFHLNPQKKTLTPVKTSP--NSRVNKLINSIDHSPS 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 11/57 (19%)
Homeodomain 186..242 CDD:459649 20/55 (36%)
YOX1NP_013685.1 COG5576 126..267 CDD:227863 39/159 (25%)

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