DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and RHOXF2

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_115887.1 Gene:RHOXF2 / 84528 HGNCID:30011 Length:288 Species:Homo sapiens


Alignment Length:126 Identity:42/126 - (33%)
Similarity:61/126 - (48%) Gaps:14/126 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 RGSSGSGT-SHSIDGILGGGAGSVGS-EDESEDDAEPSVQLKR------------KQRRSRTTFS 193
            :...|:|. .|..:|.|.|.:||.|: ||..:.:.||..|..|            .|:.:...|:
Human    78 KDGGGAGVPGHLWEGDLEGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVHAFT 142

  Fly   194 NDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQVPSFAP 254
            ..|:..|||||.|.|:|..:.|..||:|..:||..||:||.||||:.|:........:..|
Human   143 PLQLQELERIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRALMARNMLP 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 42/126 (33%)
Homeodomain 186..242 CDD:459649 24/55 (44%)
RHOXF2NP_115887.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..136 16/57 (28%)
Homeodomain 139..191 CDD:459649 24/51 (47%)
PRK02287 <183..>232 CDD:235024 6/21 (29%)
Nuclear localization signal. /evidence=ECO:0000250 186..195 3/8 (38%)

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