Protein Alignment gsb and HB40

DIOPT Version :10

• Sequence 1: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Sequence 2: NP_001329011.1
• Gene: HB40 / 829827
• AraportID: AT4G36740
• Length: 217
• Species: Arabidopsis thaliana
• Alignment Length: 199
• Identity: 43/199 - (21%)
• Similarity: 73/199 - (36%)
• Gaps: 40/199 - (20%)

  Fly   176 EPSVQLKRKQRRSRTT------------------FSNDQIDALERIFARTQYPDVYTREELAQST 222
            :|..::|:.:||.:.|                  .:::|::.||..|......:...::.||...
plant    26 QPVGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAEL 90

  Fly   223 GLTEARVQVWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSG 287
            ||...:|.|||.|||||.:.:...::......:..:.........:....:...||.::......
plant    91 GLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRL 155

  Fly   288 AYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQ-PGTGSEFMTSTYGVGSSNATYPSAAY 351
            |   ....|||  |.||.||:          |..:|.: |..|.      |.||.....|....|
plant   156 A---ERVEGGS--SNSPISSS----------VSVEANETPFFGD------YKVGDDGDDYDHLFY 199

  Fly   352 SMPQ 355
            .:|:
plant   200 PVPE 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb	NP_523863.1	PAX	19..143	CDD:128645
		Homeodomain	186..242	CDD:459649	20/73 (27%)
HB40	NP_001329011.1	HOX	56..109	CDD:197696	17/52 (33%)