Sequence 1: | NP_523863.1 | Gene: | gsb / 38005 | FlyBaseID: | FBgn0001148 | Length: | 427 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112403.2 | Gene: | Pax8 / 81819 | RGDID: | 620434 | Length: | 457 | Species: | Rattus norvegicus |
Alignment Length: | 491 | Identity: | 156/491 - (31%) |
---|---|---|---|
Similarity: | 218/491 - (44%) | Gaps: | 138/491 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 GQGRVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCVSKILNRFQETGSIRP 83
Fly 84 GVIGGSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRLLR----- 143
Fly 144 ---------------------------------GSSGSGTSHSIDGILG----GGAGSVGSEDES 171
Fly 172 ED------DAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQ 230
Fly 231 VWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHAAY 295
Fly 296 GGSVASMSP-ASSTSGTSSAAHSPVQTQAQQPGTGS------------EFMTSTYG--------- 338
Fly 339 ----VGSSNATYPSAAYSMPQTPATSAEQLRSQFASAAASG------------SHHPSTWDSYNF 387
Fly 388 AGSFFPPASAAGNHISGYHHQVDQKSSMMTTAPTYP 423 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gsb | NP_523863.1 | PAX | 19..143 | CDD:128645 | 79/123 (64%) |
homeodomain | 186..243 | CDD:238039 | 10/56 (18%) | ||
Pax8 | NP_112403.2 | PAX | 9..133 | CDD:128645 | 79/123 (64%) |
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 | 12..68 | 38/55 (69%) | |||
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 | 87..135 | 21/47 (45%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 159..226 | 14/66 (21%) | |||
Pax2_C | 344..455 | CDD:289189 | 28/127 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0849 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |