Protein Alignment gsb and Duxf3

DIOPT Version :10

• Sequence 1: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Sequence 2: XP_030101272.1
• Gene: Duxf3 / 74399
• MGIID: 1921649
• Length: 674
• Species: Mus musculus
• Alignment Length: 324
• Identity: 81/324 - (25%)
• Similarity: 106/324 - (32%)
• Gaps: 96/324 - (29%)

  Fly   144 GSSGSGTSHSIDGILGGGAGSVGSEDESEDDAEPSVQ-----------LKRKQRRSRTTFSNDQI 197
            |..|..:..||.|              |...|.|.:|           |:...||.||..::.|.
Mouse    74 GEEGHASKRSIRG--------------SRRLASPQLQEELGSRPQGRGLRSSGRRPRTRLTSLQR 124

  Fly   198 DALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLN--TQQVPSFAPTSTSFG 260
            ..|.:.|.|...|...||||||:.|||.|..:.:||.|||||.|.:..  |.|......:..|.|
Mouse   125 RILGQAFERNPRPGFATREELARDTGLPEDTIHIWFQNRRARRRHRRGRPTAQDQDLLASQGSDG 189

  Fly   261 ATPT-----------TSAAP---APNMGMSLYSSQSWPS-------------SGAYENHA-AYGG 297
            | ||           .|..|   |.:.||...|....||             .||.:..| ...|
Mouse   190 A-PTGPEGREREGAQESLLPQEEAGSTGMDTSSPSDLPSFCRESQPFQVAQPRGAGQQEAPTQAG 253

  Fly   298 SVASMSP----ASSTSGTSSAAHSPVQTQAQQPGTGSEFMTSTYGVGSSNATYPSAAYSMPQTPA 358
            :..|:.|    ..........|.:|:.......|...|        ||..:.:|.
Mouse   254 NAGSLEPLLDQLLDEVQVEEPAPAPLNLDGDPGGRVHE--------GSQKSFWPQ---------- 300

  Fly   359 TSAEQLRSQFASAAASGSHHPSTWDSYNFAGSFFPP--ASAAGNHISGYHHQVDQKSSMMTTAP 420
                      ..|.::|....|..||.:|....||.  |...|   ||   |.|.::...:|.|
Mouse   301 ----------EEAGSTGMDTSSPSDSNSFCRESFPSQVAQPCG---SG---QEDARTQADSTGP 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb	NP_523863.1	PAX	19..143	CDD:128645
		Homeodomain	186..242	CDD:459649	26/55 (47%)
Duxf3	XP_030101272.1	homeodomain	19..73	CDD:238039
		HOX	112..162	CDD:197696	21/49 (43%)