DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and RHOXF2B

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001093155.1 Gene:RHOXF2B / 727940 HGNCID:33519 Length:288 Species:Homo sapiens


Alignment Length:126 Identity:41/126 - (32%)
Similarity:60/126 - (47%) Gaps:14/126 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 RGSSGSGT-SHSIDGILGGGAGSVGS-EDESEDDAEPSVQLKR------------KQRRSRTTFS 193
            :...|:|. .|..:|.|.|.:||.|: ||..:.:.||..|..|            .|:.:...|:
Human    78 KDGGGAGVPGHLWEGNLEGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVHAFT 142

  Fly   194 NDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQVPSFAP 254
            ..|:..||.||.|.|:|..:.|..||:|..:||..||:||.||||:.|:........:..|
Human   143 PLQLQELECIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRALMARNMLP 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 41/126 (33%)
Homeodomain 186..242 CDD:459649 23/55 (42%)
RHOXF2BNP_001093155.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..136 16/57 (28%)
Homeodomain 139..191 CDD:459649 23/51 (45%)
PRK02287 <183..>232 CDD:235024 6/21 (29%)
Nuclear localization signal. /evidence=ECO:0000250 186..195 3/8 (38%)

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