Protein Alignment gsb and shox

DIOPT Version :10

• Sequence 1: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Sequence 2: XP_005167911.1
• Gene: shox / 664748
• ZFINID: ZDB-GENE-051030-21
• Length: 304
• Species: Danio rerio
• Alignment Length: 356
• Identity: 93/356 - (26%)
• Similarity: 137/356 - (38%)
• Gaps: 97/356 - (27%)

  Fly    77 ETGSIRPGVIGGSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRL 141
            |:|..|...:|.|         |:.::|:.::........:..:.:|   .:|:.....|
Zfish    31 ESGLARARELGNS---------ETNLQEITETNNNHCPVHLYKEHVE---LEKEKLKEFS----- 78

  Fly   142 LRGSSGSGTSHSIDGILGGGAGSVGSEDESED--DAEPSVQLKRKQRRSRTTFSNDQIDALERIF 204
                    .:.:.|||       ...:|:.||  ..:...|.|.|||||||.|:.:|::.|||:|
Zfish    79 --------VTRASDGI-------YDCKDKKEDVKSEDEDAQSKLKQRRSRTNFTLEQLNELERLF 128

  Fly   205 ARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPTTSAAP 269
            ..|.|||.:.||||:|..||:||||||||.||||:.|||.|.........|::...|   ...||
Zfish   129 DETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDA---CRVAP 190

  Fly   270 APNMGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSP---VQTQAQQPGTGSE 331
            ..|||                                       |...|   ||.|.|..|.|:.
Zfish   191 YVNMG---------------------------------------ALRMPFQQVQAQLQLEGVGTH 216

  Fly   332 FMTSTYGVGSSNATY---PSAAYSMPQTPATSAEQLRSQFASAAASGSHHPSTWDSYNFAGSFFP 393
            .....:...:::|.|   |...:.:|......:....:...:||.|.|.:.|..|....||..
Zfish   217 SHPHLHPHLAAHAPYLMFPPPPFGLPIASLADSASAAAAVVAAAKSNSKNSSIADLRLKAGLL-- 279

  Fly   394 PASAAGNHISGYHHQVDQKSSMMTTAPTYPY 424
                .|:.:|.:..|:        |||. ||
Zfish   280 ----GGHWLSPFQAQI--------TAPG-PY 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb	NP_523863.1	PAX	19..143	CDD:128645	10/65 (15%)
		Homeodomain	186..242	CDD:459649	34/55 (62%)
shox	XP_005167911.1	SCP-1	<1..>145	CDD:114219	39/145 (27%)
		Homeodomain	110..166	CDD:459649	34/55 (62%)