DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and PAX5

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_057953.1 Gene:PAX5 / 5079 HGNCID:8619 Length:391 Species:Homo sapiens


Alignment Length:418 Identity:146/418 - (34%)
Similarity:199/418 - (47%) Gaps:94/418 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GQGRVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCVSKILNRFQETGSIRP 83
            |.|.||||||||:||||||:.:|::|||:|..|||||.||||||||||||||||.|:.|||||:|
Human    16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKP 80

  Fly    84 GVIGGSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRLLRG---- 144
            ||||||||:||||.:..:|.|.|:..|.:|:||||.:|:...|||....||||||:|::|.    
Human    81 GVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSINRIIRTKVQQ 145

  Fly   145 --------------SSGS------------GTSHSIDGILGGGAGSVGSEDESEDD--------- 174
                          |:||            |:|:||.||||..:.|..:.....|:         
Human   146 PPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYSISGILGITSPSADTNKRKRDEGIQESPVPN 210

  Fly   175 --AEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRR 237
              :.|.....|||.|. ..|:..|::.|:|:|.|..|.|::|..|..:....||       .:..
Human   211 GHSLPGRDFLRKQMRG-DLFTQQQLEVLDRVFERQHYSDIFTTTEPIKPEQTTE-------YSAM 267

  Fly   238 ARLRKQLNTQQVPSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHAAYGGSVASM 302
            |.|...|:..:....:||....|     |:.|.|         ||:|              :.:.
Human   268 ASLAGGLDDMKANLASPTPADIG-----SSVPGP---------QSYP--------------IVTG 304

  Fly   303 SPASSTSGTSSAAHSPVQTQAQQPG-------TGSEFMTSTYGVGSSNATYPS--AAYSMPQTPA 358
            ...:||:......|.|...|.....       .||||..|.|    |:..|.|  .::..|....
Human   305 RDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPY----SHPQYSSYNDSWRFPNPGL 365

  Fly   359 TSAEQLRSQFASAAASGSHHPSTWDSYN 386
            ..:    ..:.||||.|:..|:...:|:
Human   366 LGS----PYYYSAAARGAAPPAAATAYD 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 81/123 (66%)
Homeodomain 186..242 CDD:459649 15/55 (27%)
PAX5NP_057953.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 2/4 (50%)
PAX 16..140 CDD:128645 81/123 (66%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 41/55 (75%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 21/47 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..218 7/35 (20%)
Pax2_C 279..390 CDD:463563 31/147 (21%)

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