DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and OTX1

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_055377.1 Gene:OTX1 / 5013 HGNCID:8521 Length:354 Species:Homo sapiens


Alignment Length:287 Identity:95/287 - (33%)
Similarity:134/287 - (46%) Gaps:53/287 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 GAGSVGSEDESEDDAEPSV---QLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQST 222
            |...:|....:.|...|||   ...|||||.||||:..|:|.||.:||:|:|||::.|||:|...
Human    11 GMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKI 75

  Fly   223 GLTEARVQVWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSG 287
            .|.|:||||||.||||:.|:|   ||..|            .|.:.||......:..|....|||
Human    76 NLPESRVQVWFKNRRAKCRQQ---QQSGS------------GTKSRPAKKKSSPVRESSGSESSG 125

  Fly   288 AYENHAAYGGSVASMSPASSTSGTSSAA------HSPV--QTQAQQPGTGSEFMTSTYGVGSSNA 344
            .: ...|...|.:|.|.|||:|...:||      .:||  .:....|...|.:..::...||:  
Human   126 QF-TPPAVSSSASSSSSASSSSANPAAAAAAGLGGNPVAAASSLSTPAASSIWSPASISPGSA-- 187

  Fly   345 TYPSAAYSMPQ---TPATSAEQLRSQFASAAASGSHHPSTWDSYNFAGSF---FPPASAA---GN 400
               .|:.|:|:   .|:.::...||..|.||.:.:.:|.   ||...||:   :|..|::   |.
Human   188 ---PASVSVPEPLAAPSNTSCMQRSVAAGAATAAASYPM---SYGQGGSYGQGYPTPSSSYFGGV 246

  Fly   401 HISGY------HHQVDQKSSMMTTAPT 421
            ..|.|      ||...|.|.|   ||:
Human   247 DCSSYLAPMHSHHHPHQLSPM---APS 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645
Homeodomain 186..242 CDD:459649 32/55 (58%)
OTX1NP_055377.1 Homeodomain 39..95 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..146 20/70 (29%)
TF_Otx 178..274 CDD:427350 28/104 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..305 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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