Protein Alignment gsb and sv

DIOPT Version :10

• Sequence 1: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Sequence 2: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Alignment Length: 435
• Identity: 129/435 - (29%)
• Similarity: 180/435 - (41%)
• Gaps: 103/435 - (23%)

  Fly    13 GGYPFQGQGRVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCVSKILNRFQE 77
            |.....|.|.||||||||:||||||:.:|::|||:|..|||||.||||||||||||||||:|:.|
  Fly   169 GSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYE 233

  Fly    78 TGSIRPGVIGGSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRLL 142
            |||.:.||||||||:||||.:...|...|:..|.:|:||||.:|:...:|.:.|.||||||:|::
  Fly   234 TGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIV 298

  Fly   143 RGSSGSGT-------SHSIDGILGGGAGSVGSEDESEDD-AEPSVQLKRKQRRSRTTFSNDQIDA 199
            |..:....       .|.:...||||..:..|.|.|... .||..........|    .|..:.|
  Fly   299 RNKAAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANS----VNTNVSA 359

  Fly   200 LERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPT 264
            ...:.|.            ..::|....:|.|...|..:.....:|
  Fly   360 SASVHAS------------IPTSGTDSVQVSVGHINANSNETTHIN------------------- 393

  Fly   265 TSAAPAPNMGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSA-------AH------ 316
             |.|.....|.|:..     ..|....|.::..:  :.|..::.:.|.|:       ||
  Fly   394 -STAEQRTTGYSING-----ILGIQHGHHSHNNN--NNSSVNNNNNTESSCKRKRIEAHDENHDT 450

  Fly   317 ------SPVQTQAQQPGTGSEFMTS---------------------TYGVGSSNATYPSAAYSMP 354
                  ...:.|.....:|.:..|:                     |...|:..|||..|:....
  Fly   451 NIHSDNDDGKRQRMSTYSGDQLYTNIWSGKWCIKDDHKLLAELGNLTASTGNCPATYYEASNGFS 515

  Fly   355 QTPATSAEQLRSQFASAAASGSHHPSTWDSY----NFAGSFFPPA 395
            .||.:.        :.|.|||:.....:||.    ....|.:.||
  Fly   516 TTPISG--------SGATASGNDTSMLYDSITTISQTQSSIYTPA 552

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb	NP_523863.1	PAX	19..143	CDD:128645	77/123 (63%)
		Homeodomain	186..242	CDD:459649	8/55 (15%)
sv	NP_524633.3	PAX	175..299	CDD:128645	77/123 (63%)