DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gsb and ey

DIOPT Version :9

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:780 Identity:196/780 - (25%)
Similarity:263/780 - (33%) Gaps:389/780 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCVSKILNRFQETGSIRPGVIG 87
            ||||||||:.|||||:..|::|||:|.:|.|||.|||.|:||:|||||||.|:.|||||||..||
  Fly   101 VNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIG 165

  Fly    88 GSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRLLRG-------- 144
            ||||||||.::.|:|.:.|:..|.||:||||.:|::..||...|.||||||:|:||.        
  Fly   166 GSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQ 230

  Fly   145 SSGSGTSHSIDG---------ILGGGAGSV----------------------------------G 166
            |:|||:|.:..|         .:||...:|                                  |
  Fly   231 STGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNSGEG 295

  Fly   167 SEDE------------------------------------------------------------- 170
            ||.|                                                             
  Fly   296 SEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQQSW 360

  Fly   171 ----------------------------------------------------------------- 170
                                                                             
  Fly   361 PPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVATED 425

  Fly   171 --------------------------------SEDDAEPSVQLKRKQRRSRTTFSNDQIDALERI 203
                                            :||| :..:.||||.:|:||:|:|||||:||:.
  Fly   426 IHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDD-QARLILKRKLQRNRTSFTNDQIDSLEKE 489

  Fly   204 FARTQYPDVYTREELAQSTGLTEARVQVWFSNRRA------RLRKQLNTQQVPSFAPTSTSFGAT 262
            |.||.||||:.||.||...||.|||:|||||||||      :||.|..|......:.||:|..||
  Fly   490 FERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTSAT 554

  Fly   263 PTTSAAP------------------------------------APNMGMSLYSSQS-------WP 284
            .:.:.:|                                    ||.:|..:.||:|       .|
  Fly   555 ASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIPHIRP 619

  Fly   285 SS------------------------GAYEN--------HAAYGGSVASMSP-ASSTSGTSSAAH 316
            |.                        |.::|        ||.....|.::|| .:..||:..|.:
  Fly   620 SCTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHIQSNGHAQGHALVPAISPRLNFNSGSFGAMY 684

  Fly   317 S----------------------------PVQTQAQQPGTGSEFMTSTY---------------- 337
            |                            |:...:..|..|....:|.|                
  Fly   685 SNMHHTALSMSDSYGAVTPIPSFNHSAVGPLAPPSPIPQQGDLTPSSLYPCHMTLRPPPMAPAHH 749

  Fly   338 -------------GVGSSNATYPSA-----------AYSMPQTPATSAEQLRSQFASAAASGS-- 376
                         |:||..:....|           ||::|..|..|:....|.| |||:|.|  
  Fly   750 HIVPGDGGRPAGVGLGSGQSANLGASCSGSGYEVLSAYALPPPPMASSSAADSSF-SAASSASAN 813

  Fly   377 ---HHPSTWDSYNFAGSFFPPASAAGN----HISGY-------------HHQVDQKSSMMTTAPT 421
               ||....:|..      .|.|:|.:    |.||:             |...:..||..|..|:
  Fly   814 VTPHHTIAQESCP------SPCSSASHFGVAHSSGFSSDPISPAVSSYAHMSYNYASSANTMTPS 872

  Fly   422  421
              Fly   873  872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 74/119 (62%)
homeodomain 186..243 CDD:238039 38/62 (61%)
eyNP_001014693.1 PAX 98..221 CDD:128645 74/119 (62%)
Homeobox 475..527 CDD:278475 35/51 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450844
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

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