Protein Alignment gsb and Antp

DIOPT Version :10

• Sequence 1: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Sequence 2: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 259
• Identity: 52/259 - (20%)
• Similarity: 92/259 - (35%)
• Gaps: 73/259 - (28%)

  Fly     2 AVSALNMTPYFGGYPFQGQGRVNQLGGVFINGR-PLPNHIRRQIVEMAAAGVRPCVISRQLRVSH 65
            ||..|.|.|..|..|.     |:|:.|..:|.: .||:|:.....::....|....::...:..|
  Fly   167 AVGGLGMVPEGGSPPL-----VDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHH 226

  Fly    66 GCVSKILNRFQETGSIRPGVIG---------GSKPRVATPDIESRIEELKQSQPGIFSWEIRAKL 121
            .     :..:|:...:.|  :|         |..|           .::.|..||
  Fly   227 N-----MGMYQQQSGVPP--VGAPPQGMMHQGQGP-----------PQMHQGHPG---------- 263

  Fly   122 IEAGVCDKQNAPSVSSISRLLRGSSGSGTSHSIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQR 186
                    |:.|...:     ..|..||....:...:....|..                 ::::
  Fly   264 --------QHTPPSQN-----PNSQSSGMPSPLYPWMRSQFGKC-----------------QERK 298

  Fly   187 RSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQVP 250
            |.|.|::..|...||:.|...:|.....|.|:|.:..|||.::::||.|||.:.:|:..|:..|
  Fly   299 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEP 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb	NP_523863.1	PAX	19..143	CDD:128645	19/133 (14%)
		Homeodomain	186..242	CDD:459649	19/55 (35%)
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	33/201 (16%)
		Homeodomain	298..354	CDD:459649	19/55 (35%)