Protein Alignment gsb and prrx1a

DIOPT Version :10

• Sequence 1: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Sequence 2: NP_999899.1
• Gene: prrx1a / 406431
• ZFINID: ZDB-GENE-020905-5
• Length: 245
• Species: Danio rerio
• Alignment Length: 256
• Identity: 82/256 - (32%)
• Similarity: 108/256 - (42%)
• Gaps: 61/256 - (23%)

  Fly   128 DKQNAPSVSSISRLL-----RGSSGSGTSHSIDGILGGGAG-----SVGSEDESEDDAEPSVQL- 181
            |...|....|:|.||     |...|:....|     .|.||     |.|....|:...:.:.||
Zfish    28 DHLQAKKNFSVSHLLDLEEAREMVGAQAEES-----AGEAGRSMLESPGLTSGSDTTQQENEQLN 87

  Fly   182 -----KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLR 241
                 ||||||:||||::.|:.||||:|.||.|||.:.||:||:...||||||||||.||||:.|
Zfish    88 AEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 152

  Fly   242 K-------QLNTQQVPSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHAAYGGSV 299
            :       ..|...:.||:...|:.........||.||      ...||.||.:|...|.|..|.
Zfish   153 RNERAMLASKNASLLKSFSGEVTAVEQPIVPRPAPRPN------DYLSWGSSPSYSAMATYSPSC 211

  Fly   300 ASMSPASSTSGTSSAAHSPVQTQAQQPGTGSEFMTSTYGVGSSNATYPSAAYSMPQTPATS 360
            |:.:.|...:..:|.|                           |....:..||:.|.|..:
Zfish   212 ANNTTAQGMNMANSIA---------------------------NLRLKAKEYSLNQVPTVN 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb	NP_523863.1	PAX	19..143	CDD:128645	6/19 (32%)
		Homeodomain	186..242	CDD:459649	35/55 (64%)
prrx1a	NP_999899.1	Homeodomain	101..153	CDD:459649	32/51 (63%)
		OAR	220..237	CDD:461067	3/43 (7%)