DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and eyg

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster


Alignment Length:508 Identity:151/508 - (29%)
Similarity:204/508 - (40%) Gaps:175/508 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SALNMTPYFGGYPFQGQGRVNQLGGVFINGRPLPNHIRRQ--IVEMAA-AGVRPCVISRQLRVSH 65
            :::.:.|.|||....| |..:..||.  .|..| |.:..|  ::|.:. .|:|...|::.:....
  Fly    84 TSVQIPPGFGGGGSTG-GIPHGAGGP--TGSTL-NTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQ 144

  Fly    66 GCVSKILNRFQETGSIR-PGVIGGSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDK 129
            |.|||:|      ||:| ||:||||||:||||.:.|:||:.|:..|.||:||||.:||..|||..
  Fly   145 GAVSKLL------GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTN 203

  Fly   130 QNAPSVSSISRLLRGSS------------------------GSGTSH---SIDG----------- 156
            ..|||||||:|:||..:                        ||.|.|   ::.|           
  Fly   204 ATAPSVSSINRILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPS 268

  Fly   157 ---------------------------------ILGGGAGSV----------GSEDESE------ 172
                                             ::.||||..          ||.|..|      
  Fly   269 ALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENR 333

  Fly   173 --------DDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARV 229
                    ||.||      |.||:|||||.:|::.||:.|.::.||.|.|||.|:..|.|:||||
  Fly   334 HIDSDYLDDDDEP------KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARV 392

  Fly   230 QVWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHAA 294
            |||||||||:.|:    .|..:......|..|.|             |:|.||        |.| 
  Fly   393 QVWFSNRRAKWRR----HQRMNLLKRQRSSPANP-------------LHSQQS--------NDA- 431

  Fly   295 YGGSVASMSPASSTSGTSSAAHSPVQTQAQQPGTGSEFMTSTYGVGSSNATYPSAAYSMPQTPAT 359
               ..:|.:|::.:|.::||..:|| ...|||                   .|......||.|..
  Fly   432 ---PASSPTPSNHSSASTSAPVAPV-PPPQQP-------------------LPLCGDHSPQGPPP 473

  Fly   360 SAEQLRSQFASAAASGSHHPSTWDSYNFAGSFFPPASAAGNHISGYHHQVDQK 412
            |. .|............|||          ...|...||...:|.||.|..|:
  Fly   474 SV-LLHPLHGPPGGHHHHHP----------LHLPTHPAALQLLSHYHQQQQQQ 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 56/127 (44%)
Homeodomain 186..242 CDD:459649 33/55 (60%)
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 48/102 (47%)
Homeodomain 349..405 CDD:459649 33/55 (60%)

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