DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and en

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster


Alignment Length:285 Identity:63/285 - (22%)
Similarity:104/285 - (36%) Gaps:105/285 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IRRQIVE-----MAAAGVRPCVISRQL------RVSHGCVSKILNRFQETGSIRPGVIGGSKPRV 93
            |..:||:     .||..|.|..:|.::      :.:.|.:.|.:::..:..:          |.:
  Fly   260 IHEEIVQSRLRRSAANAVIPPPMSSKMSDANPEKSALGSLCKAVSQIGQPAA----------PTM 314

  Fly    94 ATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRLL--RGSSGSGTSHSIDG 156
            ..|.:.|....|....|.                  .||.::||.|.:.  ..||.||.|.:...
  Fly   315 TQPPLSSSASSLASPPPA------------------SNASTISSTSSVATSSSSSSSGCSSAASS 361

  Fly   157 I-------LG-GGAG--------------SVGSED---ESEDDA--------------------- 175
            :       || .|:|              |..|.|   ||.||.                     
  Fly   362 LNSSPSSRLGASGSGVNASSPQPQPIPPPSAVSRDSGMESSDDTRSETGSTTTEGGKNEMWPAWV 426

  Fly   176 -------EPS--------VQLKRK---QRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQST 222
                   .||        .|.|.|   ::|.||.||::|:..|:|.|...:|.....|::|:...
  Fly   427 YCTRYSDRPSSGPRYRRPKQPKDKTNDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSEL 491

  Fly   223 GLTEARVQVWFSNRRARLRKQLNTQ 247
            ||.||::::||.|:||:::|...::
  Fly   492 GLNEAQIKIWFQNKRAKIKKSTGSK 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 20/115 (17%)
Homeodomain 186..242 CDD:459649 21/55 (38%)
enNP_523700.2 Homeodomain 455..511 CDD:459649 21/55 (38%)
Engrail_1_C_sig 512..542 CDD:431338 0/5 (0%)

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