DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and CG32532

DIOPT Version :9

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster


Alignment Length:433 Identity:109/433 - (25%)
Similarity:160/433 - (36%) Gaps:149/433 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GQG--------RVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCV---SKIL 72
            |||        |.|.:||:.                    |::..::.....:.||.|   :|.:
  Fly   324 GQGGKLSMDELRPNLVGGLL--------------------GLQQGLLEDHASMQHGGVGQDTKFM 368

  Fly    73 NRFQETGSIRPGVIGGSKPRV-----ATPDIESRIEELKQSQ-------------PGIFSWEIRA 119
            : ||:...:  |:.|..:.|:     :..|..|.|..|::|.             |..|| .:.:
  Fly   369 S-FQDQRLM--GIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSLNHQRKCSSTPEDFS-ALYS 429

  Fly   120 KLIEAGV--CDKQNAPSVSSISRL-------------LRGSSGSGTSHSIDGILGGGAG------ 163
            .|...|:  ....:.|:.:..|||             |:....||.|....||...|:|      
  Fly   430 GLPTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGLSTVSAGITSPGSGLSSLSQ 494

  Fly   164 SVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEAR 228
            ..|....:.....|:      :||.||||:.:|:..||..||::.|||:|.|||||::|.|.|||
  Fly   495 HAGHTPTTASCPTPA------RRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEAR 553

  Fly   229 VQVWFSNRRARLR---KQLNTQQVPSFAPT-----------STSFGATP-----TTSAAPAP--N 272
            :||||.||||:.|   |||.....||..|:           |.|.|..|     |.:..|..  .
  Fly   554 IQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRYPQDLFQ 618

  Fly   273 MGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQPGTGSEFMTSTY 337
            ||.|.|...:.|.|.|   |:...|||                           |...:.|...:
  Fly   619 MGASSYPGMTQPFSMA---HSTNMGSV---------------------------GVRQDSMGEFH 653

  Fly   338 GVGSSNATYPSAAYSMPQTPATSAEQLRSQFASAAASGSHHPS 380
            |:...:..|         ..:.||.::.|         ||||:
  Fly   654 GMSPEDEWY---------NKSLSALRMNS---------SHHPN 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 31/167 (19%)
homeodomain 186..243 CDD:238039 34/59 (58%)
CG32532NP_608318.5 Homeobox 513..566 CDD:278475 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450863
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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