DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and CG32532

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster


Alignment Length:433 Identity:109/433 - (25%)
Similarity:160/433 - (36%) Gaps:149/433 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GQG--------RVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCV---SKIL 72
            |||        |.|.:||:.                    |::..::.....:.||.|   :|.:
  Fly   324 GQGGKLSMDELRPNLVGGLL--------------------GLQQGLLEDHASMQHGGVGQDTKFM 368

  Fly    73 NRFQETGSIRPGVIGGSKPRV-----ATPDIESRIEELKQSQ-------------PGIFSWEIRA 119
            : ||:...:  |:.|..:.|:     :..|..|.|..|::|.             |..|| .:.:
  Fly   369 S-FQDQRLM--GIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSLNHQRKCSSTPEDFS-ALYS 429

  Fly   120 KLIEAGV--CDKQNAPSVSSISRL-------------LRGSSGSGTSHSIDGILGGGAG------ 163
            .|...|:  ....:.|:.:..|||             |:....||.|....||...|:|      
  Fly   430 GLPTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGLSTVSAGITSPGSGLSSLSQ 494

  Fly   164 SVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEAR 228
            ..|....:.....|:      :||.||||:.:|:..||..||::.|||:|.|||||::|.|.|||
  Fly   495 HAGHTPTTASCPTPA------RRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEAR 553

  Fly   229 VQVWFSNRRARLR---KQLNTQQVPSFAPT-----------STSFGATP-----TTSAAPAP--N 272
            :||||.||||:.|   |||.....||..|:           |.|.|..|     |.:..|..  .
  Fly   554 IQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRYPQDLFQ 618

  Fly   273 MGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQPGTGSEFMTSTY 337
            ||.|.|...:.|.|.|   |:...|||                           |...:.|...:
  Fly   619 MGASSYPGMTQPFSMA---HSTNMGSV---------------------------GVRQDSMGEFH 653

  Fly   338 GVGSSNATYPSAAYSMPQTPATSAEQLRSQFASAAASGSHHPS 380
            |:...:..|         ..:.||.::.|         ||||:
  Fly   654 GMSPEDEWY---------NKSLSALRMNS---------SHHPN 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 31/167 (19%)
Homeodomain 186..242 CDD:459649 34/58 (59%)
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 33/55 (60%)

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