DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and sdcbp2

DIOPT Version :9

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_997856.1 Gene:sdcbp2 / 325004 ZFINID:ZDB-GENE-030131-3727 Length:299 Species:Danio rerio


Alignment Length:68 Identity:20/68 - (29%)
Similarity:27/68 - (39%) Gaps:8/68 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 TSAAPAPNMGMSLY----SSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQ 325
            ||:.||...|  .|    ::|..|||..|.|....|..:.  ...:|.....:.|..||.||...
Zfish    26 TSSTPAITQG--AYQPQPATQGMPSSTLYPNLEELGDYMG--LSLNSDEVQRNLALVPVATQVAV 86

  Fly   326 PGT 328
            |.:
Zfish    87 PSS 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645
homeodomain 186..243 CDD:238039
sdcbp2NP_997856.1 PDZ_signaling 113..>173 CDD:238492
PDZ_signaling 198..270 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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