DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment gsb and oc

DIOPT Version :9

Sequence 1:	NP_523863.1	Gene:	gsb / 38005	FlyBaseID:	FBgn0001148	Length:	427	Species:	Drosophila melanogaster
Sequence 2:	NP_001356934.1	Gene:	oc / 31802	FlyBaseID:	FBgn0004102	Length:	664	Species:	Drosophila melanogaster

Alignment Length:	240	Identity:	83/240 - (34%)
Similarity:	116/240 - (48%)	Gaps:	42/240 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly   183 RKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQ 247
            |||||.||||:..|:|.||.:|.:|:|||::.|||:|....|.|:||||||.||||:.|:||..|
  Fly    65 RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQ 129

  Fly   248 QVPSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTS 312
            |      .|.|..::...|...:.|         |..||.|.....:.....:|.:...|:.|.:
  Fly   130 Q------QSNSLSSSKNASGGGSGN---------SCSSSSANSRSNSNNNGSSSNNNTQSSGGNN 179

  Fly   313 SAAHSPVQ--TQAQQPGTGSEFMTSTYGVGSSNATYPSAAYSMPQTPATSAEQL----RSQF--- 368
            |...|..|  :|:.|.|.||.        |.:|:...|||.:.....|.:|.|.    .|.|
  Fly   180 SNKSSQKQGNSQSSQQGGGSS--------GGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFLSA 236

  Fly   369 ASAAASGSHHPSTWD--SYNFAGSFFPPASA--------AGNHIS 403
            |:|||||..:.|..:  :.|..|:..|.:|:        ||.|:|
  Fly   237 AAAAASGGTNQSANNNSNNNNQGNSTPNSSSSGGGGGSQAGGHLS 281

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
gsb	NP_523863.1	PAX	19..143	CDD:128645
gsb	NP_523863.1	homeodomain	186..243	CDD:238039	32/56 (57%)
oc	NP_001356934.1	Homeobox	71..123	CDD:333795	29/51 (57%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450997
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.840