Protein Alignment gsb and Dux4

DIOPT Version :9

• Sequence 1: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Sequence 2: XP_006252740.1
• Gene: Dux4 / 306226
• RGDID: 1311053
• Length: 357
• Species: Rattus norvegicus
• Alignment Length: 337
• Identity: 79/337 - (23%)
• Similarity: 120/337 - (35%)
• Gaps: 95/337 - (28%)

  Fly    96 PDIESR---IEELKQSQPGIFSW-----EIRAKLIEAGVCDKQNAPSVSSISRLLRGSSGSGTSH 152
            ||:.:|   .::|..|:..|.:|     :|| |.:|...|.::
  Rat    39 PDLATRGHLAKKLGISESQIMTWFQKHRKIR-KQVEFECCSEE---------------------- 80

  Fly   153 SIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREE 217
                          |:::.:|  :|.|   ::..||||.|:..|||.|...|.:.::|.:.|||:
  Rat    81 --------------SQEQGQD--KPRV---KEAGRSRTHFTKFQIDILIEAFEKNRFPGIVTREK 126

  Fly   218 LAQSTGLTEARVQVWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPTT-SAAPA--PNMGMSLYS 279
            |||.||:.|:|:.:||.|||||........:..|..|.|:...|..|| ..||:  |....|:..
  Rat   127 LAQETGIPESRIHIWFQNRRARHPDPKQGTRATSHPPESSQCPAQKTTGQLAPSKDPTSSCSVIL 191

  Fly   280 SQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSPV---QTQAQQPGTGSEFMTSTYGVGS 341
            ..|.|       |...|....|.........|:....|.|   :...|.|....:.::.....|.
  Rat   192 PLSPP-------HTPNGPLDLSRGRQKQLPETTVLQPSQVVQRRGDDQNPSLFIDHLSEVKSPGE 249

  Fly   342 SNATYPSAAYSMPQTPATSAEQLRSQFASAAASGSHHPSTWDSYNFAGSFFPP------ASAAGN 400
            ....:..|...:|                 .....|:||     ..:|...||      .||...
  Rat   250 KEGFHTQAPLQLP-----------------IQKRGHNPS-----ENSGLSVPPLEDSTQVSAVNQ 292

  Fly   401 HISGYHHQVDQK 412
            |.    .:.|||
  Rat   293 HF----RKPDQK 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb	NP_523863.1	PAX	19..143	CDD:128645	12/54 (22%)
		homeodomain	186..243	CDD:238039	28/56 (50%)
Dux4	XP_006252740.1	homeodomain	15..71	CDD:238039	9/32 (28%)
		Homeobox	97..149	CDD:278475	26/51 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0849
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810