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Protein Alignment gsb and rx1

DIOPT Version :10

Sequence 1:	NP_523863.1	Gene:	gsb / 38005	FlyBaseID:	FBgn0001148	Length:	427	Species:	Drosophila melanogaster
Sequence 2:	NP_571300.2	Gene:	rx1 / 30472	ZFINID:	ZDB-GENE-990415-236	Length:	330	Species:	Danio rerio

Alignment Length:	273	Identity:	81/273 - (29%)
Similarity:	109/273 - (39%)	Gaps:	66/273 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   142 LRGSSGSGTSH-------SIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDA 199
            ||..|...|.|       ..||.||....::.|:.:|.|.|: ..|.|:|.||:||||:..|:..
Zfish    88 LRDGSEQPTFHDADMFSNKCDGDLGDLRKAIESDSKSPDSAD-GEQPKKKHRRNRTTFTTYQLHE 151

  Fly   200 LERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQ----LNTQQV----------P 250
            |||.|.::.|||||:|||||....|.|.||||||.||||:.|:|    .:|.::          |
Zfish   152 LERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKIDASTMKLHDSPMLSFNRP 216

  Fly   251 SFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSW-PSSGAYENHAAYGGSVASMSPASSTSGTSSA 314
            |..||     ..|..::.|.          ..| ||            .::|.:|..|..|...
Zfish   217 SMHPT-----VGPMNNSLPL----------DPWLPS------------PLSSATPVHSIPGFMG- 253

  Fly   315 AHSPVQTQAQQPG-TGSEFMTSTYGVGSSNATYPSAAYSMP-----QTPATSAEQLRSQFASAAA 373
                 .||..|.| .|..|::....:..|........|..|     :.|....:|..|..|:...
Zfish   254 -----PTQGLQTGYPGHSFLSPPQPMAQSMQPMAPPPYQCPPPFTDKYPLEDVDQRSSSIAALRM 313

  Fly   374 SGSHH----PSTW 382
            ....|    ..||
Zfish   314 KAKEHIQSMDKTW 326

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.