DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and RAX

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_038463.2 Gene:RAX / 30062 HGNCID:18662 Length:346 Species:Homo sapiens


Alignment Length:303 Identity:90/303 - (29%)
Similarity:116/303 - (38%) Gaps:115/303 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 SVSSISRLLRGSSGSGTS--HSI---------DGILG---GGAGSVGSEDES------------- 171
            |.|....||| |.|..||  |||         |||||   ...|:.|:::..             
Human    14 SFSLAGHLLR-SPGGSTSRLHSIEAILGFTKDDGILGTFPAERGARGAKERDRRLGARPACPKAP 77

  Fly   172 EDDAEPS---------------------------------------------VQLKRKQRRSRTT 191
            |:.:|||                                             .|.|:|.||:|||
Human    78 EEGSEPSPPPAPAPAPEYEAPRPYCPKEPGEARPSPGLPVGPATGEAKLSEEEQPKKKHRRNRTT 142

  Fly   192 FSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQ-------LNTQQV 249
            |:..|:..|||.|.::.|||||:|||||....|.|.||||||.||||:.|:|       :..|..
Human   143 FTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207

  Fly   250 PSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSA 314
            |..     ||..:| .||..:| :|       :.|.||        ||......|..|..|    
Human   208 PLL-----SFSRSP-PSATLSP-LG-------AGPGSG--------GGPAGGALPLESWLG---- 246

  Fly   315 AHSPVQTQAQQPGTGSEFMTSTYGVGSSNATYPSAAYSMPQTP 357
              .|:      ||.|:..:.|..|.|....:.| |:|:.|..|
Human   247 --PPL------PGGGATALQSLPGFGPPAQSLP-ASYTPPPPP 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 3/8 (38%)
Homeodomain 186..242 CDD:459649 33/55 (60%)
RAXNP_038463.2 Octapeptide motif 33..40 3/6 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..145 19/98 (19%)
Homeodomain 137..193 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..318 30/122 (25%)
OAR 319..335 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 323..336
Nuclear localization signal. /evidence=ECO:0000255 329..333
Blue background indicates that the domain is not in the aligned region.

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