DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and GSC2

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_005306.1 Gene:GSC2 / 2928 HGNCID:4613 Length:205 Species:Homo sapiens


Alignment Length:237 Identity:64/237 - (27%)
Similarity:84/237 - (35%) Gaps:96/237 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 AAAG--------VRPCVISRQLRVSHGCVSKILNRFQETGSIRPGVIGGSKPRVAT--PDIESRI 102
            ||||        .|||..|         :..||:...|.          |.|..|.  |....|.
Human     3 AAAGGAASRRGAGRPCPFS---------IEHILSSLPER----------SLPARAACPPQPAGRQ 48

  Fly   103 EELKQSQPGI-------------------------------FSWEIRAKLIEAGVCDKQNAPSVS 136
            ...|..:||.                               .:|.:|.            .|:|.
Human    49 SPAKPEEPGAPEAAPCACCCCCGPRAAPCGPPEAAAGLGARLAWPLRL------------GPAVP 101

  Fly   137 SISRLLRGSSGSGTSHSIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALE 201
                 |...:.:|.|.::.|.:|.|:                   :|:.||.||.||.:|:.|||
Human   102 -----LSLGAPAGGSGALPGAVGPGS-------------------QRRTRRHRTIFSEEQLQALE 142

  Fly   202 RIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQ 243
            .:|.:.|||||.|||.||....|.|.||:|||.||||:.|.|
Human   143 ALFVQNQYPDVSTRERLAGRIRLREERVEVWFKNRRAKWRHQ 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 23/135 (17%)
Homeodomain 186..242 CDD:459649 32/55 (58%)
GSC2NP_005306.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..58 7/24 (29%)
Homeodomain 127..183 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 185..205 64/237 (27%)

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