DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and Prop1

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_032962.1 Gene:Prop1 / 19127 MGIID:109330 Length:223 Species:Mus musculus


Alignment Length:211 Identity:65/211 - (30%)
Similarity:91/211 - (43%) Gaps:66/211 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 KPRVATPDIESRIEELKQSQPGIFSWEI-RAKLIEAGVCDKQNAPSVSSISRLLRGSSGSGTSHS 153
            :||||:..:.|.::...::...:...|: |.||     |.::..|                  ||
Mouse    24 EPRVASGTLISTVDRSSEAYRRLSGTELGRPKL-----CPQRGRP------------------HS 65

  Fly   154 IDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREEL 218
                                           :||.||||:..|::.||..|.|.||||::.||.|
Mouse    66 -------------------------------RRRHRTTFNPAQLEQLESAFGRNQYPDIWAREGL 99

  Fly   219 AQSTGLTEARVQVWFSNRRARLRKQ----------LNTQQVPSFAPTSTSFGATPTTSAAPAPNM 273
            ||.|||:|||:||||.||||:.|||          |:|.....|.|.|:::..|..|...|||..
Mouse   100 AQDTGLSEARIQVWFQNRRAKQRKQERSLLQPIAHLSTATFSGFLPESSAYPYTYGTPPPPAPCF 164

  Fly   274 GMSL-YSSQSWPSSGA 288
            .... :|..|.||:.|
Mouse   165 PHPYSHSLPSQPSTAA 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 11/53 (21%)
Homeodomain 186..242 CDD:459649 34/55 (62%)
Prop1NP_032962.1 Homeodomain 67..123 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..223 5/13 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 14/98 (14%)

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