Protein Alignment gsb and pax-1

DIOPT Version :10

• Sequence 1: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Sequence 2: NP_505120.1
• Gene: pax-1 / 187105
• WormBaseID: WBGene00003937
• Length: 257
• Species: Caenorhabditis elegans
• Alignment Length: 209
• Identity: 96/209 - (45%)
• Similarity: 124/209 - (59%)
• Gaps: 35/209 - (16%)

  Fly    23 VNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCVSKILNRFQETGSIRPGVIG 87
            ||||||||:||||||..:|.:|||::..|.|||.|||||::|||||||||.||.|.|:|.||.||
 Worm    65 VNQLGGVFVNGRPLPFEMRCKIVELSRQGTRPCDISRQLKISHGCVSKILTRFSENGTIMPGTIG 129

  Fly    88 GSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRLLRGSSGSGTSH 152
            ||:|||.||.:...|..||:|.||||:||||.:||.|.:||:.|.||||||||:||..:|..:|.
 Worm   130 GSRPRVTTPKVVEYIRSLKRSDPGIFAWEIRDRLISADICDRANLPSVSSISRILRNKNGGNSSS 194

  Fly   153 SIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQI--DALERIFARTQYPDVYTR 215
            |                       .|.||:         :..||:  ...::...:.||.: |..
 Worm   195 S-----------------------SSSQLR---------YIRDQLAEQQQQQHLQQHQYME-YNN 226

  Fly   216 EELAQSTGLTEARV 229
            .||.|.:|..:.:|
 Worm   227 NELNQISGNLDYQV 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb	NP_523863.1	PAX	19..143	CDD:128645	78/119 (66%)
		Homeodomain	186..242	CDD:459649	10/46 (22%)
pax-1	NP_505120.1	PAX	61..185	CDD:128645	78/119 (66%)