Sequence 1: | NP_523863.1 | Gene: | gsb / 38005 | FlyBaseID: | FBgn0001148 | Length: | 427 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035168.1 | Gene: | Pax4 / 18506 | MGIID: | 97488 | Length: | 349 | Species: | Mus musculus |
Alignment Length: | 340 | Identity: | 132/340 - (38%) |
---|---|---|---|
Similarity: | 171/340 - (50%) | Gaps: | 69/340 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 GQGRVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCVSKILNRFQETGSIRP 83
Fly 84 GVIGGSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRLLRGSSGS 148
Fly 149 GTSH----SIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQY 209
Fly 210 PDVYTREELAQSTGLTEARVQVWFSNRRARLRKQ-------------------------LNTQQ- 248
Fly 249 ---VPSFA-----PTSTSF-----GATP------TTSAA------------PAPNMGMSLYSSQS 282
Fly 283 WPSSGAYENHAAYGG 297 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gsb | NP_523863.1 | PAX | 19..143 | CDD:128645 | 70/123 (57%) |
homeodomain | 186..243 | CDD:238039 | 31/56 (55%) | ||
Pax4 | NP_035168.1 | PAX | 5..129 | CDD:128645 | 70/123 (57%) |
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 | 8..64 | 36/55 (65%) | |||
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 | 83..131 | 22/47 (47%) | |||
Homeobox | 174..226 | CDD:278475 | 29/51 (57%) | ||
Transcription repression | 278..349 | 14/62 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0849 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |