DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and GSC

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_776248.1 Gene:GSC / 145258 HGNCID:4612 Length:257 Species:Homo sapiens


Alignment Length:87 Identity:37/87 - (42%)
Similarity:58/87 - (66%) Gaps:2/87 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 RKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQ 247
            |::||.||.|:::|::|||.:|..|:||||.|||:||:...|.|.:|:|||.||||:.|:|..:.
Human   158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSS 222

  Fly   248 QVPSFAPTSTSFGATPTTSAAP 269
            ...|  ..:..:..|.::.|:|
Human   223 SEES--ENAEKWNKTSSSKASP 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645
Homeodomain 186..242 CDD:459649 30/55 (55%)
GSCNP_776248.1 Homeodomain 161..217 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..257 7/32 (22%)
Blue background indicates that the domain is not in the aligned region.

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