DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and Poxn

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_314947.5 Gene:Poxn / 1275678 VectorBaseID:AGAMI1_009473 Length:636 Species:Anopheles gambiae


Alignment Length:463 Identity:147/463 - (31%)
Similarity:209/463 - (45%) Gaps:92/463 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SALNMTPYFGGYPFQGQGRVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCV 68
            :|:|..|.....|..||..||||||||:||||||:.:||:|||:|..|||||.|||||.||||||
Mosquito    65 TAINKPPTIVEMPHTGQAGVNQLGGVFVNGRPLPDIVRRRIVELALMGVRPCDISRQLLVSHGCV 129

  Fly    69 SKILNRFQETGSIRPGVIGGSKPR-VATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNA 132
            ||||.||.||||||||.|||||.: ||||.:..:|...||..||:|:||||.:|:...:||....
Mosquito   130 SKILTRFYETGSIRPGSIGGSKTKQVATPTVVKKILRFKQENPGMFAWEIRDQLLSQRICDPNTI 194

  Fly   133 PSVSSISRLLRGSSGSGTSHSIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQI 197
            |||||::|:||               .||..:        ||...:.|:.|:...|.:.:...:.
Mosquito   195 PSVSSVNRILR---------------NGGMWT--------DDMTSNEQMLRESSHSSSAYMQSKA 236

  Fly   198 DALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQVPSFAPTSTSFGAT 262
            .:...::::|    :...:.|......:.|.|....:::.            |:.....:.:|:.
Mosquito   237 MSSHPLYSQT----LEQHQALLNQYRYSMAAVSPDHASKH------------PNLPHHHSPYGSP 285

  Fly   263 PTTSAAPAP----NMGMSLYSSQSWPSSGAY----ENHAAYGGSVASMSPASSTSGTSSAAHSPV 319
            |   .||.|    ...:::...:|.|.:|..    |.|..:  :|:.:.....|:|.:...|...
Mosquito   286 P---GAPGPMVQRTAAVNIIQHESLPPTGTTKQPPEMHHQH--TVSPLQTQPLTAGHNPHQHHHH 345

  Fly   320 QTQAQQ-----PGTGSEFMTSTYGVGSSNATYPSAAYSMP--QTPATSAEQLRSQFA-------- 369
            ..|.||     |......::|..| |.|.:...|:..|.|  .||.:||....:|..        
Mosquito   346 HHQQQQHGKPSPSVSMPDLSSPKG-GDSKSEPSSSTRSTPTGSTPVSSAPPNPAQMPYLPKHWIW 409

  Fly   370 -----SAAASGSH----HPSTWDSYNFAGSFFPPASAA-----------GNHISG---YHHQVDQ 411
                 .||..|.|    .|||..|...|.:....|:||           ||...|   :..|::.
Mosquito   410 NTSLFYAANRGQHAPGADPSTVSSAAAAAAAAAAAAAAAAAFPHGYFTYGNPFGGGAPFPGQIES 474

  Fly   412 KSSMMTTA 419
            .....|||
Mosquito   475 SLRSDTTA 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 80/124 (65%)
Homeodomain 186..242 CDD:459649 5/55 (9%)
PoxnXP_314947.5 None

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