DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and sv

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_061505297.1 Gene:sv / 1272219 VectorBaseID:AGAMI1_004208 Length:561 Species:Anopheles gambiae


Alignment Length:430 Identity:133/430 - (30%)
Similarity:195/430 - (45%) Gaps:65/430 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GRVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCVSKILNRFQETGSIRPGV 85
            |.||||||||:||||||:.:|::|||:|..|:|||.||||||||||||||||:|:.||||.:.||
Mosquito    20 GGVNQLGGVFVNGRPLPDLVRQRIVELAHNGIRPCDISRQLRVSHGCVSKILSRYYETGSFKAGV 84

  Fly    86 IGGSKPRVATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSSISRLLRGSSGSGT 150
            ||||||:||||.:...|...|...|.:|:||||.||:..|:|...|.||||||:|::|..:....
Mosquito    85 IGGSKPKVATPPVVEAIAAYKLQNPTMFAWEIRDKLLADGICVHDNVPSVSSINRIVRNKAAEKA 149

  Fly   151 SHSIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDAL--------ERIFART 207
            .:|          |..|::.|.|  .|.:..:..|::.::.....|.:.|        |.:.:..
Mosquito   150 KYS----------SQRSDNSSMD--SPRILSRNNQQQQQSQQQQQQQECLNQQMQADQESMKSPQ 202

  Fly   208 QYPDVYTRE-ELAQSTGLTEARVQVWFSNRRARLRKQLNTQQVPSFAPTSTSFGATPTTSAAPAP 271
            |..:|.::. .:....||::..:. ..|::|.|:::.      |.....:|:....|.|......
Mosquito   203 QVENVASQSYSINGLLGLSQKSLS-GSSSKRRRIKED------PGKHLLTTNTILRPLTPRFSLA 260

  Fly   272 NMGMSLYS------SQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQPGTGS 330
            :|..|:.|      .....|.....:....||            |.........|.|.||...|.
Mosquito   261 DMKGSMLSCIKRDKETKDMSESMLHDSIGKGG------------GQDQQQQQQQQQQQQQQDKGH 313

  Fly   331 EF------MTSTYGVGSSNATYP---SAAYSMPQT---PAT-SAEQLRSQ----FASAAASGSHH 378
            :.      ..|:..:...:...|   .|.:|..:|   |.| |:..:||:    |..|....:|.
Mosquito   314 DLFVGGVDFVSSLAMAQDDGNNPDNQQAGFSSMRTGPRPGTMSSSPIRSRENALFLLAGGDKAHK 378

  Fly   379 PSTWDSYNFAGSFFPPASAAGNHISGYHHQVDQKSSMMTT 418
            ....|.....|......|:|..|  ....|..|.:.:.||
Mosquito   379 YHRTDEPMPTGVIIEDDSSARKH--QQQQQAHQANDVKTT 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645 77/121 (64%)
Homeodomain 186..242 CDD:459649 10/64 (16%)
svXP_061505297.1 None

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