Sequence 1: | NP_523863.1 | Gene: | gsb / 38005 | FlyBaseID: | FBgn0001148 | Length: | 427 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446162.1 | Gene: | Pax3 / 114502 | RGDID: | 620431 | Length: | 484 | Species: | Rattus norvegicus |
Alignment Length: | 454 | Identity: | 210/454 - (46%) |
---|---|---|---|
Similarity: | 246/454 - (54%) | Gaps: | 111/454 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 GYPFQ-----GQGRVNQLGGVFINGRPLPNHIRRQIVEMAAAGVRPCVISRQLRVSHGCVSKILN 73
Fly 74 RFQETGSIRPGVIGGSKPR-VATPDIESRIEELKQSQPGIFSWEIRAKLIEAGVCDKQNAPSVSS 137
Fly 138 ISRLLRGSSGSG------------------TSHSIDGILGGGAGSVGSEDESEDDAEPSVQLKRK 184
Fly 185 QRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQV 249
Fly 250 PSF---APTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHAAYGGSVASMSPAS---ST 308
Fly 309 SGTSSAAHSPVQTQAQQPGTGSEFMTSTYGVGSSNATYPSAAYSMPQTPATSAEQLRSQFASAAA 373
Fly 374 SGSHHPSTWDSYNFAGSFFPPAS-------AAGNHIS-----------GYHH--QVDQKSSMMT 417 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gsb | NP_523863.1 | PAX | 19..143 | CDD:128645 | 95/124 (77%) |
homeodomain | 186..243 | CDD:238039 | 42/56 (75%) | ||
Pax3 | NP_446162.1 | PAX | 34..159 | CDD:128645 | 95/124 (77%) |
MFAP1 | 164..>286 | CDD:336570 | 64/121 (53%) | ||
Homeobox | 222..276 | CDD:333795 | 39/53 (74%) | ||
Pax7 | 347..391 | CDD:289156 | 18/68 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 211 | 1.000 | Domainoid score | I2702 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0849 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1126858at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000011 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9073 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105365 | |
Panther | 1 | 1.100 | - | - | O | PTHR45636 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1205 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.780 |