Protein Alignment gsb and Prrx2

DIOPT Version :10

• Sequence 1: NP_523863.1
• Gene: gsb / 38005
• FlyBaseID: FBgn0001148
• Length: 427
• Species: Drosophila melanogaster
• Sequence 2: NP_001402085.1
• Gene: Prrx2 / 113931
• RGDID: 1311471
• Length: 248
• Species: Rattus norvegicus
• Alignment Length: 199
• Identity: 78/199 - (39%)
• Similarity: 98/199 - (49%)
• Gaps: 29/199 - (14%)

  Fly   137 SISRLLRGSSGSGTSHSIDGILGG-----GA------GSVGSEDESEDDAEPS------VQLKRK 184
            |:|.||.....:.......|.:.|     ||      ||.|||...:|...||      .:.|:|
  Rat    34 SVSHLLDLEEVAAAGRRAAGPVPGPEAREGAAREPSGGSSGSEAAPQDGDCPSPGHGSATKRKKK 98

  Fly   185 QRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQV 249
            |||:||||::.|:.||||:|.||.|||.:.|||||:...|:||||||||.||||:.|:.......
  Rat    99 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 163

  Fly   250 PSFAPTSTSFG--ATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHAAY--GGSVASMSPASSTSG 310
            ...|....|:|  |......||.|......|  .|||:|..|.:...|  |||    |||  |.|
  Rat   164 TRSASLLKSYGQEAAIEQPVAPRPTTLSPDY--LSWPASSPYSSVPPYSPGGS----SPA--TPG 220

  Fly   311 TSSA 314
            .:.|
  Rat   221 VNMA 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsb	NP_523863.1	PAX	19..143	CDD:128645	3/5 (60%)
		Homeodomain	186..242	CDD:459649	35/55 (64%)
Prrx2	NP_001402085.1	Homeodomain	104..156	CDD:459649	32/51 (63%)
		COG5576	<110..214	CDD:227863	45/105 (43%)
		OAR	222..238	CDD:461067	1/3 (33%)