DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gsb and CPHXL

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001342542.1 Gene:CPHXL / 105371346 HGNCID:51815 Length:405 Species:Homo sapiens


Alignment Length:304 Identity:71/304 - (23%)
Similarity:108/304 - (35%) Gaps:74/304 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 SIDGILGGGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREE 217
            ::||..||...     :|...:.|...:.|||.:. |..||.:.:..|:.||....|||..||:.
Human     2 NLDGTSGGFPA-----EEDHHNEERQTKNKRKTKH-RHKFSEELLQELKEIFGENCYPDYTTRKT 60

  Fly   218 LAQSTGLTEARVQVWFSNRRARL-----RKQLNTQQVPSFAPTSTSFGATPTTSAAPAPNMGMSL 277
            ||.........:..||.|:||||     |:....|:...|...:.||.:...|.|| |.|     
Human    61 LAIKFDCPVNVIDNWFQNKRARLPPAERRRIFVLQKKHDFPVQAHSFLSCQETQAA-AHN----- 119

  Fly   278 YSSQSWPSSGAYENHAAYGGSVASMSPA-----------SSTSGTSSAAHSPVQTQAQQPGTGSE 331
            |:::          .:..|...|.|..|           |...|.:..:....:|.:||.|    
Human   120 YATK----------QSLSGAQRALMRRAGCSHLEKQWIPSQEMGYNCFSLENQETPSQQVG---- 170

  Fly   332 FMTSTYGVGSSNATYPSAAYSMPQTPATSAEQLRSQFASAAASG--SHHPSTWDSYNFAGSFFPP 394
                           |..:|.  :.|...::|:.||.:.....|  |...::..||...|:...|
Human   171 ---------------PQCSYL--EKPGIPSQQVGSQCSYLEKLGIPSQQVASQSSYLVTGTEKHP 218

  Fly   395 ASAAG------------NHISGYHHQVDQKSSMMTTAP-TYPYF 425
            ..|.|            .|.:.||......:..:...| :.|||
Human   219 GCAMGYGGDTGSGHSGSGHSTAYHFLSYNSAECLHPPPSSVPYF 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645
Homeodomain 186..242 CDD:459649 20/60 (33%)
CPHXLNP_001342542.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 9/36 (25%)
HOX 28..82 CDD:197696 18/54 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..363
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.