DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and prop1

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_004914810.1 Gene:prop1 / 101734397 XenbaseID:XB-GENE-22068967 Length:242 Species:Xenopus tropicalis


Alignment Length:211 Identity:68/211 - (32%)
Similarity:95/211 - (45%) Gaps:46/211 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 QRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQQ- 248
            :||.|||||.:|::.||..|::..|||:|.|||||:.|.|.|||:||||.||||:.||...|.| 
 Frog    66 RRRHRTTFSQEQLEHLETAFSKNHYPDIYCREELAKITKLNEARIQVWFQNRRAKHRKHERTTQK 130

  Fly   249 --VPSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYE-----NHAAYGGSVASMS--- 303
              |||...|..|.               ||...|.| |.|..|:     ||.....|::|..   
 Frog   131 STVPSSMLTCGSL---------------MSGMCSMS-PPSRQYQYPHALNHIPRFSSMSSAGYHP 179

  Fly   304 PASSTSGTSSAAHSPVQTQAQQPGTGSEFMTSTYGVGSSNATYPSAAYSMPQTPATSAEQLRSQF 368
            |::.:..|..:.|..:|..........::..|...:.|..|...|:..::  ||.|:.:      
 Frog   180 PSAVSQFTCPSNHPHLQPAGPPSRQHDDWYNSLRSISSPGAGLSSSMITL--TPVTALD------ 236

  Fly   369 ASAAASGSHHPST-WD 383
                      ||| |:
 Frog   237 ----------PSTHWN 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645
Homeodomain 186..242 CDD:459649 33/55 (60%)
prop1XP_004914810.1 Homeodomain 73..123 CDD:459649 28/49 (57%)
Blue background indicates that the domain is not in the aligned region.

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