DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and mxtx1

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_571635.3 Gene:mxtx1 / 100149566 ZFINID:ZDB-GENE-000710-7 Length:309 Species:Danio rerio


Alignment Length:259 Identity:67/259 - (25%)
Similarity:96/259 - (37%) Gaps:98/259 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 GAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLT 225
            |:|:|.               :...||.||:||.:.::.|...|....||.:..||.|:|:|||.
Zfish    15 GSGAVS---------------RSASRRKRTSFSKEHVELLRATFETDPYPGISLRESLSQTTGLP 64

  Fly   226 EARVQVWFSNRRARL------RKQLNTQQVPSFAPTST-----------SFGATPTTSAAP---- 269
            |:|:||||.|||||.      :|.|....:|::....|           |.|||.|..:.|    
Zfish    65 ESRIQVWFQNRRARTLKCKGGKKPLWQTDLPAYNNMQTSPMQIHRKNNESSGATGTLCSPPPAYP 129

  Fly   270 ----------------APNMGMSL-----YSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSS 313
                            .|: .||:     |.:.|:..|.|.::|         :||         
Zfish   130 DRIKEEMEKDAVCGCDTPS-SMSISDDSGYCTPSYHQSRAIQSH---------LSP--------- 175

  Fly   314 AAHSPVQTQAQQ--PGTGSEF--------MTSTYGVGSSNATYPSAAYS--------MPQTPAT 359
               ||:.:...|  |..|..:        |.|.|.: .:.|..|...||        .|.||.|
Zfish   176 ---SPILSPEHQMPPNWGVRYGRRSPMSSMWSPYHL-EAYACNPGFFYSHSEKHNTLQPLTPVT 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645
Homeodomain 186..242 CDD:459649 28/61 (46%)
mxtx1NP_571635.3 None
Blue background indicates that the domain is not in the aligned region.

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