DRSC/TRiP Functional Genomics Resources

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Protein Alignment gsb and DUXB

DIOPT Version :10

Sequence 1:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001338236.1 Gene:DUXB / 100033411 HGNCID:33345 Length:345 Species:Homo sapiens


Alignment Length:188 Identity:49/188 - (26%)
Similarity:80/188 - (42%) Gaps:44/188 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 EDESEDDAEPSVQ--LKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQ 230
            :.:..|.::...|  |.::.|:.:|..:..|.:.|.:.|.|..:||:.||::||:.|||.|:|:|
Human    83 QTQGHDQSQHLTQEYLPKEARQKQTFITWTQKNRLVQAFERNPFPDIATRKKLAEQTGLQESRIQ 147

  Fly   231 VWFSNRRARLRKQLNTQQV------PSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSG-- 287
            :||..:|:...|:...:.:      |:..|.:| .|..|.....|..:   |.|.|.|..|||  
Human   148 MWFQKQRSLYLKKSRMEPMNLLVDDPNERPDAT-VGWHPINLFLPTDS---SHYFSCSHSSSGHE 208

  Fly   288 --------------AYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQPGTGSE 331
                          .:..|.:.|.:|..|.|                |||.|.|..|:
Human   209 TLPPVLPSTQAPWDPFRFHVSQGPNVMIMQP----------------TQAVQEGEKSD 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gsbNP_523863.1 PAX 19..143 CDD:128645
Homeodomain 186..242 CDD:459649 21/55 (38%)
DUXBNP_001338236.1 homeodomain 16..72 CDD:238039
homeodomain 103..161 CDD:238039 22/57 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..314
Blue background indicates that the domain is not in the aligned region.

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